Mercurial > repos > jjohnson > snpeff_3_3
comparison tool_dependencies.xml @ 0:9d35993e61c7 draft default tip
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author | jjohnson |
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date | Tue, 02 Jul 2013 06:00:58 -0400 |
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-1:000000000000 | 0:9d35993e61c7 |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <package name="snpEff" version="3.3"> | |
4 <install version="1.0"> | |
5 <actions> | |
6 <action type="download_by_url">http://sourceforge.net/projects/snpeff/files/snpEff_v3_3_core.zip</action> | |
7 <action type="move_directory_files"> | |
8 <source_directory>.</source_directory> | |
9 <destination_directory>$INSTALL_DIR</destination_directory> | |
10 </action> | |
11 <action type="set_environment"> | |
12 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> | |
13 </action> | |
14 <action type="set_environment"> | |
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/scripts</environment_variable> | |
16 </action> | |
17 </actions> | |
18 </install> | |
19 <readme> | |
20 </readme> | |
21 </package> | |
22 </tool_dependency> | |
23 |