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comparison snpEff_cds_report.xml @ 3:57edf4d08816

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Update version
author Jim Johnson <jj@umn.edu>
date Sun, 21 Apr 2013 14:18:21 -0500
parents cdbdac66d6b5
children 85b933b7d231
comparison
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2:15a54fa11ad7 3:57edf4d08816
1 <tool id="SnpEff-cds-report" name="SnpEff Ensembl CDS" version="1.0"> 1 <tool id="SnpEff-cds-report" name="SnpEff Ensembl CDS" version="1.1">
2 <description>Report Variant coding sequence changes for SnpEffects</description> 2 <description>Report Variant coding sequence changes for SnpEffects</description>
3 <command interpreter="python"> 3 <command interpreter="python">
4 snpEff_cds_report.py --in $snp_effect_vcf 4 snpEff_cds_report.py --in $snp_effect_vcf
5 #if len($ensembl_host.__str__.strip) > 0: 5 #if len($ensembl_host.__str__.strip) > 0:
6 --ensembl_host ${ensembl_host}.archive.ensembl.org 6 --ensembl_host ${ensembl_host}.archive.ensembl.org