Mercurial > repos > john-mccallum > dnaclust

view fastaselect.sh @ 2:13656c2d7c73 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded fastaselect as sh
author john-mccallum
date Wed, 26 Jun 2013 22:41:02 -0400
parents
children
line wrap: on
line source

#!/bin/env sh
##runs fastaselect using  input cluster list and multifasta
fastafile=$1
clusterfile=$2
outputfile=$3

cat $clusterfile | fastaselect  -c  -f  $fastafile > $outputfile