Mercurial > repos > johnheap > vapper
diff data/Motifs/Phylotype11b.hmm @ 0:36cb22bd911d draft
planemo upload for repository https://github.com/johnheap/VAPPER-Galaxy
| author | johnheap |
|---|---|
| date | Wed, 04 Jul 2018 16:39:13 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data/Motifs/Phylotype11b.hmm Wed Jul 04 16:39:13 2018 -0400 @@ -0,0 +1,106 @@ +HMMER3/f [hmmer3.1-snap20121016 | October 2012] +NAME Phylotype12.2 +LENG 28 +ALPH amino +RF no +MM no +CONS yes +CS no +MAP yes +DATE Thu Jul 30 09:30:38 2015 +NSEQ 11 +EFFN 11.000000 +CKSUM 1188814779 +STATS LOCAL MSV -7.0433 0.72870 +STATS LOCAL VITERBI -7.1696 0.72870 +STATS LOCAL FORWARD -3.3150 0.72870 +HMM A C D E F G H I K L M N P Q R S T V W Y + m->m m->i m->d i->m i->i d->m d->d + COMPO 2.75755 2.86320 2.94237 2.92244 3.64495 1.88651 3.48503 3.32484 2.72914 2.74552 4.12302 2.90340 3.92729 3.74754 3.27942 2.59681 3.29265 2.84135 4.87562 2.66668 + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.18528 6.05380 1.79110 0.61958 0.77255 0.00000 * + 1 3.45162 5.80235 1.54775 3.15955 5.08886 1.96832 4.44173 4.54016 3.23229 4.09132 2.64813 1.83292 4.62201 3.56937 3.71984 3.44237 2.50475 4.16723 6.28420 2.78698 1 d - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00419 5.87271 6.59506 0.61958 0.77255 1.33581 0.30509 + 2 2.34073 4.85519 5.09565 4.49861 1.94941 2.45134 4.87747 3.29540 4.34346 1.82073 3.97229 4.62022 4.92771 4.52901 2.37388 2.45018 3.65979 2.31139 5.47138 2.58465 2 l - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00419 5.87271 6.59506 0.61958 0.77255 1.33581 0.30509 + 3 3.89959 5.25148 5.67736 5.13518 1.36435 5.00279 1.81431 3.70306 4.93418 2.26240 4.37498 5.04857 5.35363 5.01734 4.94348 2.69815 4.12919 2.27784 5.23374 1.74134 3 f - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00419 5.87271 6.59506 0.61958 0.77255 1.33581 0.30509 + 4 3.62824 5.37442 4.42685 3.85713 4.23638 4.55175 2.65057 1.99543 2.18568 3.57795 4.48265 4.24962 4.92989 4.05452 3.91871 2.28846 3.85384 3.67031 5.70648 1.07180 4 y - 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- - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00350 6.05380 6.77614 0.61958 0.77255 0.48576 0.95510 + 8 3.51963 5.22078 4.42960 3.86129 4.35462 2.79891 4.76397 2.63088 1.96414 2.44527 2.49311 1.63005 4.88618 4.11034 4.15759 2.75550 2.66272 2.45399 5.80544 4.57475 8 n - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.16312 6.05380 1.90943 0.61958 0.77255 0.48576 0.95510 + 9 3.42410 5.14521 4.30063 3.73060 4.27525 4.40018 1.92089 1.84029 3.65791 3.35585 2.65592 2.54711 1.95349 3.97830 2.65659 3.64668 3.65499 3.41969 5.71856 2.73665 9 i - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.10015 5.89477 2.38004 0.61958 0.77255 1.26931 0.32993 + 10 4.17392 6.67748 1.71218 3.40365 6.24046 1.00210 2.23199 5.81492 4.20694 5.28289 6.13086 3.97974 5.11601 4.29660 4.83936 1.59662 4.51906 5.29046 7.41941 5.88152 10 g - 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