Mercurial > repos > johnheap > vapper
diff data/Motifs/Phylotype13c.hmm @ 0:36cb22bd911d draft
planemo upload for repository https://github.com/johnheap/VAPPER-Galaxy
| author | johnheap |
|---|---|
| date | Wed, 04 Jul 2018 16:39:13 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data/Motifs/Phylotype13c.hmm Wed Jul 04 16:39:13 2018 -0400 @@ -0,0 +1,91 @@ +HMMER3/f [hmmer3.1-snap20121016 | October 2012] +NAME Phylotype14.3 +LENG 23 +ALPH amino +RF no +MM no +CONS yes +CS no +MAP yes +DATE Tue Jul 28 15:58:32 2015 +NSEQ 60 +EFFN 38.909912 +CKSUM 3233938693 +STATS LOCAL MSV -6.6788 0.72026 +STATS LOCAL VITERBI -6.9771 0.72026 +STATS LOCAL FORWARD -4.0744 0.72026 +HMM A C D E F G H I K L M N P Q R S T V W Y + m->m m->i m->d i->m i->i d->m d->d + COMPO 2.82531 2.05809 2.83212 2.72052 4.92550 1.77574 3.19463 5.51568 2.78183 2.41318 4.82188 2.55520 4.24228 3.10702 3.14577 2.60296 3.43608 4.49851 5.62702 5.05682 + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.00000 * + 1 7.01107 8.01775 8.77332 8.31849 3.20015 8.32030 8.14471 5.10292 8.25414 0.06323 5.46284 8.56639 8.06829 7.70758 7.96962 8.04077 7.16390 5.59755 7.84986 6.65931 1 L - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 2 8.34315 0.00289 8.63533 8.72712 9.21980 7.64340 9.22864 9.61784 8.90281 8.69461 10.02758 8.98808 8.29482 9.20396 8.64220 8.70546 8.79460 9.18010 9.53267 9.46273 2 C - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 3 7.54892 8.78173 8.11156 8.19720 8.82444 0.03738 3.42029 9.28623 8.52188 8.48711 9.67952 8.39243 8.09022 8.76084 8.41245 7.79307 8.06777 8.65950 9.43200 8.95840 3 G - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 4 6.02769 8.04179 6.83606 5.72883 7.74637 6.52368 6.18378 6.93456 0.80333 3.41886 3.76168 3.78842 6.80350 1.69600 1.38118 5.98377 3.87397 6.63710 8.11162 7.09134 4 k - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 5 4.90543 7.45655 4.68111 2.40883 6.80898 2.58035 3.80172 6.31243 3.34027 5.77584 6.53805 2.03107 5.97607 4.93288 5.14828 0.60863 2.87848 5.86007 7.90261 6.45661 5 S - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 6 0.35773 7.16803 5.39593 3.66777 6.70654 5.67962 5.93377 6.11499 3.38724 5.62949 6.43818 5.31157 2.89405 5.06731 2.67458 3.87025 5.22426 2.85251 7.76193 6.48468 6 A - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 7 2.52999 6.91065 4.64784 4.09193 6.25691 2.80047 5.35934 5.74307 1.73079 5.21642 5.95156 3.19092 4.12515 2.30009 2.15672 2.65479 1.35855 3.39982 7.34299 5.93212 7 t - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 8 6.01756 8.95144 1.02714 0.85882 8.14723 5.93698 6.66491 7.80072 2.96014 3.56579 8.17495 2.12474 6.67294 5.86511 6.78886 5.78603 6.35833 7.28167 9.34034 7.61603 8 e - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 9 6.90500 7.92712 8.88122 8.29286 2.65839 8.54636 8.55818 4.92678 8.22956 0.15723 2.84989 8.76595 8.05187 7.63296 7.94048 8.10794 7.04441 5.43308 8.03209 7.21002 9 L - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00104 7.26521 7.98755 0.61958 0.77255 0.48576 0.95510 + 10 6.26419 7.96412 7.72635 7.04886 6.55898 0.19164 7.12006 7.37986 5.61442 3.08293 7.73690 7.00320 7.34885 6.60294 2.59920 6.40967 6.65583 7.05010 3.33781 6.48628 10 G - 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