Mercurial > repos > johnheap > vapper
diff data/Motifs/Phylotype4.4.hmm @ 0:36cb22bd911d draft
planemo upload for repository https://github.com/johnheap/VAPPER-Galaxy
| author | johnheap |
|---|---|
| date | Wed, 04 Jul 2018 16:39:13 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data/Motifs/Phylotype4.4.hmm Wed Jul 04 16:39:13 2018 -0400 @@ -0,0 +1,145 @@ +HMMER3/f [hmmer3.1-snap20121016 | October 2012] +NAME Phylotype4.4 +LENG 41 +ALPH amino +RF no +MM no +CONS yes +CS no +MAP yes +DATE Thu Jul 23 11:10:06 2015 +NSEQ 29 +EFFN 5.108276 +CKSUM 485695351 +STATS LOCAL MSV -7.4082 0.71946 +STATS LOCAL VITERBI -7.6560 0.71946 +STATS LOCAL FORWARD -4.2413 0.71946 +HMM A C D E F G H I K L M N P Q R S T V W Y + m->m m->i m->d i->m i->i d->m d->d + COMPO 2.11233 5.54980 3.04085 1.95779 3.49784 2.77351 4.03338 2.89368 2.58091 2.26145 4.53480 3.53725 3.75428 3.39430 2.96468 2.63257 3.01560 3.39918 5.62672 3.37540 + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.13476 5.36501 2.10867 0.61958 0.77255 0.00000 * + 1 2.67268 5.42574 3.26557 2.70910 2.36109 3.14906 3.17259 4.20852 2.27472 3.71843 4.47430 3.25158 2.33924 2.64430 2.17449 2.37521 3.21843 3.80143 5.87501 4.48331 1 r - 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- - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00697 5.36501 6.08736 0.61958 0.77255 0.48576 0.95510 + 38 4.60002 5.81690 6.23045 6.02877 4.95293 5.57508 6.68405 0.16281 5.96316 3.41263 4.82558 6.15896 6.03949 6.24847 6.02571 5.44227 4.92310 2.94415 6.92758 5.77278 75 I - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00697 5.36501 6.08736 0.61958 0.77255 0.48576 0.95510 + 39 5.48271 6.40992 5.92508 5.91261 2.92904 5.77454 3.22201 5.20057 5.66019 4.27395 5.68320 5.34924 6.09131 5.52301 5.54990 5.28822 5.69513 5.14955 4.60547 0.19000 76 Y - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00697 5.36501 6.08736 0.61958 0.77255 0.48576 0.95510 + 40 2.51817 5.74320 3.35601 0.51937 5.51895 4.01566 4.72139 4.94576 3.64543 4.53359 5.35625 3.72930 4.65782 3.88975 4.13906 3.51546 2.41392 4.45507 6.71797 5.32231 77 E - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00697 5.36501 6.08736 0.61958 0.77255 0.48576 0.95510 + 41 3.93478 6.64189 1.63734 0.68040 5.94107 4.10634 4.71048 5.50677 3.80730 4.95322 5.81778 3.55404 4.76570 3.88051 4.47116 3.78098 2.20325 5.02881 7.09802 5.51788 78 E - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.00470 5.36274 * 0.61958 0.77255 0.00000 * +//