Mercurial > repos > johnheap > vapper
diff data/Motifs/Phylotype4a.hmm @ 0:36cb22bd911d draft
planemo upload for repository https://github.com/johnheap/VAPPER-Galaxy
| author | johnheap |
|---|---|
| date | Wed, 04 Jul 2018 16:39:13 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data/Motifs/Phylotype4a.hmm Wed Jul 04 16:39:13 2018 -0400 @@ -0,0 +1,142 @@ +HMMER3/f [hmmer3.1-snap20121016 | October 2012] +NAME Phylotype4.A +LENG 40 +ALPH amino +RF no +MM no +CONS yes +CS no +MAP yes +DATE Thu Jul 23 12:01:45 2015 +NSEQ 4 +EFFN 1.097656 +CKSUM 1218734851 +STATS LOCAL MSV -7.5272 0.71953 +STATS LOCAL VITERBI -7.9356 0.71953 +STATS LOCAL FORWARD -4.1841 0.71953 +HMM A C D E F G H I K L M N P Q R S T V W Y + m->m m->i m->d i->m i->i d->m d->d + COMPO 2.31203 4.92021 2.60091 1.96907 3.51270 3.55561 3.62548 2.84997 2.67282 2.43235 4.30163 3.22101 3.43428 3.30209 2.85380 2.43251 3.14859 3.27199 5.51054 3.60253 + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.00000 * + 1 3.35724 5.29780 3.55547 3.12746 4.77124 3.78655 4.02647 4.22914 0.62352 3.72049 4.67725 3.52926 4.27321 3.20782 2.58034 3.38410 3.59007 3.92175 5.68367 4.55893 2 K - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.48576 0.95510 + 2 3.26036 5.36545 3.72199 2.98566 4.88299 3.84216 3.72160 4.20429 1.01955 3.59703 4.47284 3.36277 4.19302 2.85078 1.61489 3.24293 3.40451 3.88419 5.59417 4.46310 3 k - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.48576 0.95510 + 3 3.31989 4.99760 3.96895 3.87226 4.80993 3.66510 4.90443 4.47001 3.96516 4.04775 5.12360 4.13463 0.35959 4.34147 4.15420 3.50232 3.79279 4.06930 5.87668 4.94046 4 P - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.48576 0.95510 + 4 2.54060 4.45729 3.57816 3.42873 4.47406 3.18281 4.51855 4.05619 3.52908 3.75262 4.65688 3.57931 3.95535 3.85044 3.79072 0.64575 3.05133 3.50601 5.81852 4.56501 5 S - 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- - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.48576 0.95510 + 38 3.82467 5.16175 4.40625 4.21863 2.41007 4.27822 3.85730 3.78892 4.06751 3.14321 4.42678 4.20912 4.74957 4.28012 4.16846 3.91792 4.11658 3.67855 4.06301 0.52018 76 Y - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.48576 0.95510 + 39 3.33021 5.46741 2.71595 0.59483 4.86937 3.55673 4.19813 4.40201 3.13107 3.96555 4.94140 3.21589 4.18420 3.41740 3.56614 3.28432 3.64305 4.05375 5.96855 4.71441 77 E - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.02160 4.24172 4.96406 0.61958 0.77255 0.48576 0.95510 + 40 2.66111 4.50153 3.81181 3.60214 4.35087 3.32357 4.58402 3.52676 3.55285 3.37622 4.41487 3.73574 4.06213 3.93159 3.78166 2.86812 0.67181 3.17831 5.75283 4.57244 78 T - - - + 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 + 0.01459 4.23471 * 0.61958 0.77255 0.00000 * +//