Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype6.hmm @ 24:728b1d375b41 draft
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| author | johnheap |
|---|---|
| date | Tue, 04 Jun 2019 18:03:36 -0400 |
| parents | 36cb22bd911d |
| children |
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HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype6.1 LENG 17 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Fri Jul 24 12:06:02 2015 NSEQ 60 EFFN 21.990967 CKSUM 1082650495 STATS LOCAL MSV -6.3464 0.72070 STATS LOCAL VITERBI -6.0906 0.72070 STATS LOCAL FORWARD -4.4150 0.72070 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.09095 6.78454 6.31059 4.94311 3.98231 2.91799 4.43568 3.77086 5.45936 2.95179 4.58366 1.80870 5.11460 3.14726 2.13216 2.10519 1.71190 3.45796 7.67295 3.63687 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.00000 * 1 4.94409 7.20602 5.26708 3.70996 6.72822 5.55509 5.47383 6.06583 3.27283 3.72635 6.26657 5.03075 2.59333 0.34366 2.78093 3.78910 5.10045 5.70318 7.42632 6.24488 1 Q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 2 4.93341 6.88431 5.59180 5.68371 7.42714 5.47795 7.12545 7.24615 6.45227 6.82377 7.64093 0.08038 6.32264 6.48132 6.74588 3.18641 5.50415 6.31151 8.65865 7.48648 2 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 3 0.37075 6.32671 6.38771 3.53251 6.78301 3.19061 6.97505 6.21545 6.22897 5.92773 6.72964 5.89608 5.99623 6.37198 6.36906 2.87955 3.74490 1.99190 8.16839 7.06314 3 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 4 4.47258 6.39428 6.77929 6.76482 7.35653 3.20863 7.35492 6.88734 6.57816 6.56057 7.27554 6.08459 6.06565 6.77115 3.68806 0.37747 1.52056 5.86950 8.66026 7.67811 4 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 5 2.30865 6.51948 5.73555 3.10143 7.34177 0.23044 7.09528 6.81298 6.43961 6.52231 7.28737 5.79667 6.08152 6.44582 6.65074 4.75835 5.15196 3.60680 8.66422 7.55145 5 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 6 5.06842 6.98145 5.87978 5.96383 7.54452 5.60846 7.30048 7.33407 6.58291 6.91479 7.75225 0.07420 6.44804 6.68318 6.80600 5.24258 3.24162 6.42349 8.69516 7.63983 6 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 7 6.19942 7.25417 8.23116 7.66164 5.10635 7.87273 8.08335 3.04517 7.60732 0.21953 3.07080 8.09805 7.48156 7.11336 7.38380 7.41202 6.36509 2.45142 7.58009 6.81199 7 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 8 6.25749 7.80646 7.70417 7.78075 8.23812 6.50392 8.33774 8.23644 7.87896 7.64409 8.70009 7.58516 7.26897 8.09206 7.72212 6.50108 0.01091 7.47845 8.89054 8.48713 8 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 9 0.34779 6.35336 7.11609 7.13938 7.21741 5.17672 7.46125 6.54974 6.94898 6.39242 7.15206 6.15723 6.06447 6.95708 6.82938 2.91947 2.73453 1.88020 8.59353 7.61117 9 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 10 6.94034 7.70344 7.57939 7.62572 1.37782 7.23774 1.68280 6.45919 7.31777 3.73724 6.93668 6.69316 7.46734 6.89549 2.43997 6.66170 7.10974 6.43211 5.78782 0.83217 10 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 11 4.90940 6.86085 5.59751 5.68938 7.42509 5.46094 7.12450 7.22937 6.45368 6.81171 7.62378 0.09339 6.30762 6.48018 6.74274 2.94083 5.48151 6.28963 8.66146 7.49130 11 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 12 0.65454 6.21179 6.84029 6.60600 6.31669 5.18566 6.94888 5.61585 6.42493 5.42826 3.25941 6.01217 5.99946 6.51588 6.40785 2.52876 1.30792 2.82020 7.78689 6.67762 12 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 13 4.94589 6.79089 7.13935 7.14844 7.00050 5.60574 7.61939 6.43760 6.94422 5.88860 3.31728 6.53124 6.45583 7.15092 6.89906 5.17969 0.07291 5.95499 8.48533 7.44785 13 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 14 6.28811 7.87933 7.40051 6.43268 7.41063 6.51542 6.69749 7.10373 4.81972 6.26360 3.23340 6.56990 6.99290 5.90575 0.07072 6.37637 6.49711 6.88357 8.17550 7.23125 14 R - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 15 3.63641 6.22114 7.07538 6.58431 3.04197 6.32747 7.04593 1.12564 6.46810 4.21076 5.41056 6.59964 6.68210 6.66143 6.54978 5.73306 0.67437 2.93400 7.45438 6.24573 15 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 16 5.41190 7.24170 6.88359 6.30504 7.60945 5.92861 6.73363 7.20077 4.94212 6.56689 7.47022 6.29451 6.61237 5.94964 0.10606 2.69636 5.86001 6.55126 8.30449 7.38997 16 R - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00181 6.71063 7.43297 0.61958 0.77255 0.48576 0.95510 17 5.70838 7.43162 7.41968 7.49884 7.99041 6.15899 8.11400 7.95050 7.64098 7.43670 8.35377 7.15205 6.97204 7.77332 7.52564 0.01540 6.29617 7.04282 8.83328 8.22429 17 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00122 6.71003 * 0.61958 0.77255 0.00000 * //