Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype12.hmm @ 27:92c5ecb025b6 draft
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| author | johnheap |
|---|---|
| date | Wed, 05 Jun 2019 16:17:30 -0400 |
| parents | 36cb22bd911d |
| children |
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HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype13.3 LENG 26 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Wed Jul 29 15:10:18 2015 NSEQ 41 EFFN 30.216980 CKSUM 2444189330 STATS LOCAL MSV -6.2563 0.72009 STATS LOCAL VITERBI -6.5810 0.72009 STATS LOCAL FORWARD -4.0849 0.72009 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.13085 4.16814 2.53748 2.80871 3.61513 2.12326 2.32880 3.98863 2.72121 2.99470 4.22031 2.95070 4.09066 3.86543 2.67260 2.60940 2.70619 3.20397 4.61308 2.83857 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.00000 * 1 4.83303 7.03444 5.28131 4.61534 6.39189 5.56956 2.04820 5.77045 1.58328 3.23933 2.78040 3.10111 5.92732 4.71380 1.27421 4.83653 2.01980 5.43870 3.02189 6.14823 1 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 2 5.02401 7.65122 2.09690 4.28894 6.94069 5.42593 1.17480 6.48733 4.79765 5.94142 6.73735 1.61126 2.55729 1.99533 5.37110 3.45824 5.29084 6.02874 8.06601 2.63748 2 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 3 5.93694 7.83109 7.08968 5.77116 7.73391 6.37996 6.05982 6.86321 0.58655 6.10293 7.02877 5.95380 6.69188 5.18504 1.69269 1.99573 2.34234 6.55969 7.97812 7.01912 3 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 4 6.44586 7.53366 7.72613 7.46520 2.68584 7.23978 6.17654 5.69394 7.02367 0.44036 6.16692 6.93592 3.68834 6.94641 1.99579 6.63566 6.64306 5.81237 6.26580 2.25012 4 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 5 6.37446 3.13047 8.11566 8.19865 8.59908 0.05314 8.65679 8.55002 8.24715 7.97254 8.95047 7.82558 7.49360 8.40562 8.04707 6.61738 6.95732 7.67957 9.23027 8.89387 5 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 6 6.95763 8.44402 6.85139 3.64383 8.13166 0.06465 8.18689 8.70642 7.58248 7.96280 9.10318 7.34252 7.62515 7.75788 7.75470 7.08745 7.44670 8.09719 3.55749 8.13289 6 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02533 7.01839 3.72474 0.61958 0.77255 0.48576 0.95510 7 2.20122 5.74477 6.01781 5.41915 1.24873 5.45982 5.77808 4.18390 3.44919 3.20435 3.47446 5.52904 5.82639 5.43979 2.04615 2.34227 2.08470 3.06857 6.36177 2.85918 7 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00136 6.99442 7.71676 0.61958 0.77255 0.29580 1.36232 8 4.18520 2.13746 1.77453 2.30374 6.04550 4.95844 2.27698 5.53243 2.69713 5.00491 3.88059 2.42548 5.35195 3.00588 2.26418 2.32431 3.44138 5.09043 7.13089 5.71913 8 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 9 4.28886 6.80913 1.55138 1.12829 6.15342 2.07018 5.23722 5.64222 2.65202 5.11309 3.76431 3.54260 5.43774 4.33683 3.02690 4.24526 4.52228 5.19985 7.23895 2.44746 9 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 10 1.97986 7.70536 1.38283 4.56146 7.40316 5.55197 0.91945 6.96501 5.35971 6.43320 7.27049 2.94990 6.23424 5.44675 5.99001 2.31258 3.64467 6.40515 8.57356 7.04584 10 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.51159 7.01839 0.91738 0.61958 0.77255 0.48576 0.95510 11 4.56784 7.15459 3.01589 3.85557 6.37385 4.98268 0.98937 5.98267 2.93102 5.43829 6.24313 1.14392 5.53818 4.54217 4.81466 3.36578 4.82998 5.53878 7.52069 2.43164 11 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00222 6.50901 7.23136 0.61958 0.77255 0.04148 3.20327 12 4.49241 6.72176 4.88757 4.35933 2.07084 5.25438 5.52999 5.56727 3.25468 5.12372 5.92488 2.01678 2.29978 4.66772 3.72021 3.24831 0.76275 5.19190 7.30680 5.98297 12 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 13 1.90506 6.72478 4.45345 1.03729 6.06771 4.99248 5.18801 2.34402 3.07315 5.03015 5.77138 4.46328 3.14698 2.02928 4.41423 2.32448 4.46062 5.11539 7.16248 5.75499 13 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 14 1.80112 6.62583 2.01893 5.01653 6.18072 3.38516 6.23281 5.61593 5.29385 2.23227 6.16428 5.39853 6.05915 5.51624 5.69703 0.96891 5.08889 5.26128 7.58510 2.02052 14 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 15 6.13061 2.24355 0.54965 6.16104 4.63351 6.66327 2.33198 6.11886 6.60506 1.97210 6.68577 6.30389 7.12488 6.54521 6.76054 6.18536 6.39500 5.99318 6.30272 3.05492 15 D - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 16 1.95825 6.99117 7.46755 7.53354 7.62773 0.35455 7.94493 7.50764 7.46701 7.13782 7.90671 6.74863 6.65327 7.51621 7.35783 5.33367 5.71346 6.50132 1.97621 7.84865 16 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 17 4.96731 7.23366 5.40097 4.78115 6.88857 2.26081 5.75719 6.27753 2.01380 5.67865 6.48326 3.77189 6.05848 4.87184 1.53575 0.92823 2.49821 5.84742 7.70532 6.47403 17 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 18 5.45771 7.83974 0.76474 4.72348 7.84404 1.97761 6.58724 7.46777 5.90454 6.93203 7.84531 2.20233 6.41384 5.80167 6.66169 2.14302 1.96209 6.77873 9.07399 7.47450 18 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 19 2.22732 7.56067 4.53075 0.55199 6.95985 5.45143 5.86559 6.46714 3.42232 5.91309 6.70883 4.92559 6.00320 2.32657 5.17554 1.99073 5.27799 6.00592 8.02657 6.57465 19 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 20 4.28004 6.26352 4.84491 2.95516 3.30123 5.16265 5.37315 4.83748 1.25910 2.25853 5.35047 4.76088 5.54703 3.40619 1.88350 4.38337 3.05565 2.04218 6.80010 2.43144 20 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 21 4.93159 7.28165 5.26997 4.61925 6.75778 5.61124 1.73113 6.14681 1.92762 5.54121 6.34240 1.56729 5.97493 4.71639 2.17265 1.75726 2.04100 5.75308 7.57067 6.32190 21 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 22 4.75272 6.09971 6.73348 6.12440 2.04144 5.95488 6.28642 1.17557 5.91720 2.75430 1.56261 2.29268 6.27731 6.01018 5.91225 5.27644 2.01603 4.16956 6.70597 5.55610 22 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 23 6.51033 7.82223 7.27100 7.28197 4.63260 6.94811 0.47518 6.88156 7.05812 5.96473 7.34782 6.83286 7.45968 7.06151 7.00524 6.48252 1.40824 6.73208 6.30601 2.23840 23 H - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 24 2.99744 2.22683 7.48651 7.47795 7.30755 5.58418 7.83782 5.63330 7.29355 6.17013 7.15753 6.55007 1.98147 7.32730 7.19287 5.08916 5.40535 0.38972 8.87665 7.84637 24 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 25 5.54915 6.99642 7.10987 6.09512 5.27092 6.38466 0.93302 5.41185 4.65818 2.43293 5.99012 6.14353 6.68334 5.59763 1.07796 5.81157 5.70922 2.22355 3.87132 5.30891 25 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00133 7.01839 7.74073 0.61958 0.77255 0.48576 0.95510 26 1.95730 7.23276 6.46413 6.54009 5.30654 6.01591 6.65393 7.06594 6.96740 6.35117 7.51379 2.21978 6.80686 6.93370 7.05501 5.56828 5.97019 6.49412 6.95947 0.32593 26 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00090 7.01795 * 0.61958 0.77255 0.00000 * //