Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype13a.hmm @ 27:92c5ecb025b6 draft
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| author | johnheap |
|---|---|
| date | Wed, 05 Jun 2019 16:17:30 -0400 |
| parents | 36cb22bd911d |
| children |
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HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype14.1 LENG 19 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Jul 28 16:27:03 2015 NSEQ 3 EFFN 3.000000 CKSUM 3093060998 STATS LOCAL MSV -6.7082 0.72505 STATS LOCAL VITERBI -6.8337 0.72505 STATS LOCAL FORWARD -3.8518 0.72505 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.47924 1.91926 2.83439 3.35071 4.28868 1.92877 3.84701 2.98486 3.43339 3.08189 4.99840 3.99859 4.54541 3.64707 3.34265 2.30221 3.06635 2.83915 3.27001 2.53423 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.00000 * 1 4.29855 0.10028 5.77903 5.78110 5.77175 4.59606 6.25487 5.29727 5.71123 5.04500 6.22088 5.61060 5.34072 6.00555 5.61979 4.56287 4.83824 4.91742 6.78097 6.01854 1 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 2 3.02268 5.23372 3.37314 2.98013 4.97088 1.63718 4.21433 4.42723 1.49394 3.95115 4.73915 3.44327 4.25097 3.35530 3.28784 1.62572 3.35373 3.94809 6.08670 4.76345 2 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 3 4.38137 5.94081 5.22664 5.27215 6.19954 0.08431 6.19771 6.15946 5.56295 5.60855 6.66681 5.39550 5.33385 5.81061 5.58400 4.59559 4.92251 5.50436 6.92319 6.36842 3 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.28833 4.92694 1.41373 0.61958 0.77255 0.48576 0.95510 4 3.34515 5.91492 1.15706 2.49930 5.20500 3.61294 4.15557 4.78205 3.14375 4.24796 5.10450 3.08457 4.23586 1.30099 3.71239 3.22651 3.63613 4.33912 6.35911 4.85778 4 d - - - 2.68628 4.42235 2.77530 2.73133 3.46364 2.40523 3.72505 3.29364 2.67751 2.69365 4.24700 2.90357 2.73750 3.18157 2.89811 2.37785 2.77530 2.98529 4.58487 3.61513 0.46354 1.00426 5.37523 0.10557 2.30072 0.26958 1.44265 5 2.89356 4.83222 4.31982 4.26018 5.47750 0.72461 5.34283 5.02710 4.51214 4.68541 5.45809 4.18579 4.40932 4.68138 4.71813 1.24546 3.46052 4.18042 6.77312 5.65434 6 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 6 4.75690 5.89417 5.20186 5.03953 2.56183 5.19715 1.38050 4.63093 4.78525 3.79450 5.13036 4.77208 5.53043 4.86640 4.82076 4.65566 4.97326 4.54264 4.23434 0.64196 7 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 7 3.19057 5.21774 3.96099 3.49658 5.09430 3.84936 4.44950 4.57607 2.91985 4.09993 4.94280 3.81724 4.45264 3.62457 1.40795 0.87264 3.56445 4.09365 6.15806 4.94236 8 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 8 3.00698 5.30025 3.10880 1.52108 4.84251 3.66366 4.12533 4.29913 2.94716 3.84781 4.63643 3.29253 4.19240 3.26502 3.42700 1.58404 1.74556 3.86275 6.02528 4.64619 9 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.33132 4.92694 1.29180 0.61958 0.77255 0.48576 0.95510 9 3.07777 5.33496 1.27867 2.65337 4.92033 3.53755 4.20129 4.34199 3.18561 3.96618 4.82464 3.18757 4.17167 3.38252 3.71341 3.07313 1.28877 3.91577 6.16035 4.75313 10 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01489 4.61051 5.33285 0.61958 0.77255 0.25474 1.49217 10 4.03276 5.28593 5.68929 5.42310 4.36140 5.12978 6.07788 0.30585 5.30548 2.82748 4.22785 5.56348 5.55700 5.60112 5.40490 4.84191 4.34432 2.41811 6.37488 5.16997 11 I - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 11 4.29855 0.10028 5.77903 5.78110 5.77175 4.59606 6.25487 5.29727 5.71123 5.04500 6.22088 5.61060 5.34072 6.00555 5.61979 4.56287 4.83824 4.91742 6.78097 6.01854 12 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 12 3.81074 5.18723 5.53612 5.31808 4.61167 4.79531 6.03761 2.58028 5.23451 3.17087 4.49373 5.34410 5.36627 5.55797 5.34702 4.44980 4.18522 0.27818 6.51146 5.29766 13 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 13 3.24875 5.69464 1.49203 2.71309 5.12157 1.63591 4.17291 4.62048 2.99362 4.10441 4.90177 3.26875 4.29391 3.31121 1.70191 3.19240 3.52336 4.17753 6.22854 4.81129 14 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 14 4.99618 6.06306 5.50145 5.47688 3.03415 5.14289 4.56794 4.93796 5.34433 4.11379 5.49786 5.19187 5.62424 5.36166 5.27931 4.99638 5.30063 4.85723 4.68580 0.17648 15 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 15 3.07107 5.34105 1.50520 2.83353 5.02671 3.65738 4.27169 4.50284 3.16941 4.05125 4.84509 3.34557 4.25384 3.42509 3.67633 1.51135 1.67402 4.01900 6.22336 4.82847 16 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 16 2.89356 4.83222 4.31982 4.26018 5.47750 0.72461 5.34283 5.02710 4.51214 4.68541 5.45809 4.18579 4.40932 4.68138 4.71813 1.24546 3.46052 4.18042 6.77312 5.65434 17 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.28833 4.92694 1.41373 0.61958 0.77255 0.48576 0.95510 17 4.88152 5.91896 5.41569 5.34424 3.86378 4.74096 5.15629 5.04869 5.12774 4.27972 5.62529 5.38609 5.32476 5.46177 5.09546 5.08305 5.23282 4.94738 0.15640 3.83752 18 W - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01427 4.65288 5.37523 0.61958 0.77255 0.26958 1.44265 18 4.29855 0.10028 5.77903 5.78110 5.77175 4.59606 6.25487 5.29727 5.71123 5.04500 6.22088 5.61060 5.34072 6.00555 5.61979 4.56287 4.83824 4.91742 6.78097 6.01854 19 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 19 3.48371 5.13896 4.66925 4.42336 4.28566 1.49304 5.18896 3.62533 4.35517 0.64979 4.30932 4.56883 4.84444 4.66485 4.52342 3.76510 3.88843 3.52207 5.93830 4.75271 20 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00730 4.92341 * 0.61958 0.77255 0.00000 * //