Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype11.hmm @ 23:99cdfbd01d97 draft
Uploaded
| author | johnheap |
|---|---|
| date | Tue, 04 Jun 2019 18:02:41 -0400 |
| parents | 36cb22bd911d |
| children |
line wrap: on
line source
HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype11 LENG 22 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Fri Jul 24 13:28:46 2015 NSEQ 25 EFFN 25.000000 CKSUM 2273933145 STATS LOCAL MSV -6.6146 0.73033 STATS LOCAL VITERBI -6.8423 0.73033 STATS LOCAL FORWARD -3.9990 0.73033 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.09064 5.63016 3.22081 1.95971 3.38019 3.40352 4.92360 3.12146 2.49955 2.85583 5.22122 2.78930 2.33664 3.23004 3.54699 2.12082 2.14904 3.57935 6.87487 4.23471 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.00000 * 1 4.87588 7.28309 4.81526 2.31359 6.73428 5.44220 5.56169 6.14732 0.96102 5.54434 6.35361 4.90890 2.58477 1.17708 4.32277 4.81341 2.70152 5.74228 7.58472 6.29433 1 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 2 1.35410 6.70930 2.88926 1.34530 6.05182 3.18537 5.12735 5.54345 2.56859 5.01393 5.75529 4.36389 5.32137 2.88627 4.38797 4.13518 1.75732 5.09949 7.14084 5.71877 2 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 3 2.95845 7.84390 1.33389 0.71013 7.13798 5.37688 5.93164 6.69118 2.34047 6.13480 6.97630 4.81997 6.01012 5.09133 5.59401 5.00322 5.43694 2.97475 8.27312 6.71705 3 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.06167 6.83446 2.83483 0.61958 0.77255 0.48576 0.95510 4 2.52838 7.14110 1.03790 1.39652 6.46429 5.08976 5.44906 5.97418 4.30089 2.69531 6.20859 2.26305 5.59999 4.57218 2.57846 4.48196 4.81494 5.52393 7.56864 6.10603 4 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.14599 6.77449 2.00480 0.61958 0.77255 0.21042 1.66201 5 4.02813 6.18111 4.42951 3.90234 5.43118 4.84784 5.09044 4.85052 3.90337 2.59899 5.28794 1.56071 1.11437 2.84696 4.35611 2.28607 3.02418 4.53294 6.71561 2.97493 5 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00183 6.69941 7.42176 0.61958 0.77255 0.12682 2.12773 6 4.22283 5.59592 6.19112 5.57680 2.73674 5.39244 5.72157 1.98702 5.36070 1.13376 4.70143 5.55657 1.68327 5.48838 5.36610 2.04903 3.36043 3.83728 6.20687 3.10320 6 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 7 2.51835 6.48121 6.57071 6.40608 7.11191 5.28748 7.18547 6.56413 6.38331 6.26745 7.04220 6.05431 0.72301 2.05913 6.51000 1.81797 5.13488 2.14936 8.46301 7.38162 7 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 8 2.17690 5.76512 5.20987 2.96589 4.88701 5.17034 3.33888 2.75229 4.57214 2.79745 4.87359 2.97474 2.13867 4.85040 4.87494 3.07679 2.22214 1.24242 6.36008 5.14405 8 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 9 4.04737 6.50447 4.31456 2.16988 5.82914 4.82771 5.01674 3.52485 2.75306 3.01995 5.55140 4.30408 1.09296 2.59043 4.24337 1.94585 2.33639 4.88426 6.94945 5.55288 9 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 10 2.86331 7.09421 2.20804 0.51940 6.42158 5.10805 5.44482 5.92274 2.93120 2.75043 6.16291 4.56685 5.60259 4.56533 4.80589 4.47151 2.95271 5.47956 7.53024 6.08054 10 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 11 4.16081 6.25363 4.64543 4.09596 5.50395 4.99793 5.24141 4.91339 4.04420 2.81393 5.37485 0.89171 2.17350 4.41730 2.93910 2.67596 2.14437 4.60844 6.80398 2.73527 11 n - - - 2.68708 4.42315 2.77280 2.73213 3.46444 2.40602 3.72584 3.29444 2.67830 2.69445 4.24779 2.89180 2.73829 3.18236 2.89890 2.37976 2.77609 2.98608 4.58567 3.61593 0.42975 1.05323 7.55680 0.01446 4.24365 0.48576 0.95510 12 6.30322 8.48627 5.13504 0.07519 8.13541 6.16074 6.86504 7.87250 3.07175 7.16690 8.20746 5.77373 6.84963 6.09585 6.11445 6.14062 6.61940 7.41544 8.85822 7.73419 13 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 13 2.52145 6.58491 7.19116 7.25691 7.55414 5.38031 7.68032 7.08475 7.14513 6.78758 7.51559 6.35749 6.27043 7.16801 7.03302 4.90091 0.11385 6.06911 8.84880 7.92325 14 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 14 4.87204 6.80093 6.11630 6.20456 7.54802 5.49691 7.40991 7.26232 6.78465 6.88732 7.65440 2.51353 6.36375 6.80829 6.93898 0.11999 5.46157 6.26915 8.80677 7.72381 15 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 15 2.24178 6.59894 5.91542 2.04021 7.40464 0.58128 7.09937 6.94019 6.32355 6.57807 7.31308 5.87432 6.15072 6.40654 6.58322 2.45428 2.33138 5.99787 8.69699 7.56524 16 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 16 4.18332 3.14560 5.32426 3.14218 2.34767 5.19965 5.53441 4.29195 4.69946 2.46924 4.93027 2.87726 5.60255 4.96759 4.98283 0.95018 1.66385 4.07808 6.41628 5.20449 17 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 17 4.90255 6.22756 6.73275 6.21099 0.68740 6.00268 5.83917 3.04497 5.99312 1.99381 5.27242 6.05322 2.75386 6.02953 5.96058 2.46996 5.13151 4.48575 6.09758 2.18297 18 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 18 4.21457 5.59630 6.13602 5.52350 4.68412 5.37841 5.71279 1.05477 5.31036 1.31823 3.01234 5.52827 3.07825 5.45494 2.70646 2.52132 2.86929 3.83511 6.21886 5.04330 19 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 19 4.56162 6.64886 5.13731 4.68924 6.34993 5.27516 5.80424 2.36379 1.85808 5.33499 6.15729 1.82850 5.83025 4.96963 4.77095 2.67790 0.79564 5.32529 7.52033 6.25346 20 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 20 4.22221 6.59851 4.43737 2.57496 5.94460 4.96828 5.20169 1.64150 3.93811 4.92230 5.69730 1.76918 5.39007 4.32037 2.53254 1.14779 2.79514 5.00066 7.08927 5.71498 21 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 21 4.26352 6.46380 4.66702 4.08839 3.27917 5.06686 2.99811 5.13997 2.02605 3.02474 5.53489 4.59201 0.95641 1.90889 4.27842 4.28971 2.39553 4.81499 6.91956 5.60228 22 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00160 6.83446 7.55680 0.61958 0.77255 0.48576 0.95510 22 5.94434 7.79585 7.04607 5.63073 7.62575 6.31748 5.87302 6.72078 0.38110 5.93708 6.87664 2.98899 6.57478 4.99720 1.45886 5.89430 5.93484 6.46058 7.79735 6.85490 23 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00108 6.83393 * 0.61958 0.77255 0.00000 * //