Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype11a.hmm @ 23:99cdfbd01d97 draft
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| author | johnheap |
|---|---|
| date | Tue, 04 Jun 2019 18:02:41 -0400 |
| parents | 36cb22bd911d |
| children |
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HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype12.1 LENG 24 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Wed Jul 29 11:54:06 2015 NSEQ 64 EFFN 64.000000 CKSUM 2634953749 STATS LOCAL MSV -6.9012 0.72285 STATS LOCAL VITERBI -7.0426 0.72285 STATS LOCAL FORWARD -3.7767 0.72285 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.58914 2.48672 3.02391 3.37037 2.97905 1.76807 4.73799 3.65499 3.46769 2.94384 5.68355 2.87127 3.73673 3.95413 3.48222 2.48301 3.00258 2.88711 5.75687 2.37571 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.00000 * 1 5.13239 6.50131 7.08484 6.48060 1.19234 2.27771 3.65701 3.66616 6.26381 2.45237 5.62157 3.52214 6.65538 6.38367 6.26566 2.31220 5.36429 3.66960 6.99986 1.28495 1 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 2 2.91884 6.64402 7.21752 6.63210 0.60980 4.30821 3.68330 5.08626 6.41325 2.50873 5.76914 6.56151 6.78918 6.51574 6.40586 4.14173 5.51487 2.87611 6.97864 1.68522 2 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 3 5.13643 6.50418 7.09953 6.49471 2.32016 6.30036 6.56913 3.30242 6.27675 3.60318 5.62347 3.51677 6.66246 6.39611 6.27655 3.82266 2.43208 3.31951 7.01702 0.44948 3 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02893 7.75457 3.57255 0.61958 0.77255 0.48576 0.95510 4 7.42633 8.41472 8.81151 8.56585 2.32870 8.41244 7.31463 3.76558 8.39634 0.24829 6.29490 8.12331 8.39985 7.93066 8.14049 3.44127 7.59265 6.29506 7.31603 2.83081 4 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00066 7.72630 8.44864 0.61958 0.77255 0.18891 1.75943 5 5.69242 7.59286 8.03611 8.10862 8.45367 0.10309 8.62156 8.10574 8.10375 2.85199 8.50195 7.33511 7.26377 8.12509 8.00846 3.51819 6.29723 7.09272 9.73590 8.77802 5 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01120 7.75457 4.53639 0.61958 0.77255 0.48576 0.95510 6 4.91763 7.42766 3.28771 1.82564 6.76774 0.67856 5.87104 6.25435 4.61747 5.73089 6.47192 5.13065 6.07138 2.49662 3.90940 2.45816 5.15090 4.19335 3.86377 3.58923 6 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.74401 8.46635 0.61958 0.77255 0.30458 1.33725 7 4.83525 7.34845 3.17668 3.27190 6.69460 1.66286 5.79558 3.28065 2.79273 3.53772 6.38882 2.09518 2.58769 3.17677 2.87105 1.65362 2.78531 3.31147 7.78048 6.36888 7 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 8 2.41191 7.34832 3.13024 2.17234 6.69441 1.40417 5.79562 3.91612 3.02340 4.03405 6.38871 2.23734 2.94643 4.89164 2.87708 2.55509 2.39850 3.88442 7.78039 6.36882 8 g - - - 2.68661 4.42085 2.77982 2.73105 3.46816 2.39476 3.72957 3.29816 2.67761 2.69817 4.25152 2.90404 2.74202 3.18609 2.89623 2.38349 2.75759 2.98602 4.58939 3.61498 0.90307 0.75917 2.06655 0.42503 1.06059 0.48576 0.95510 9 2.94128 7.22579 2.91210 3.15980 6.57224 2.09516 5.67209 6.05919 1.95394 5.53166 6.26609 1.73168 3.39676 3.59630 2.67681 2.90408 2.35184 2.65148 3.15298 6.24586 11 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.07163 7.61942 2.67902 0.61958 0.77255 0.79794 0.59830 10 2.75406 7.11248 2.92521 4.45834 3.83666 1.17116 5.70270 3.40510 2.46082 5.39828 6.16533 3.38843 5.90248 4.81596 3.10305 1.98507 2.13250 3.19187 7.57325 3.76565 12 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.03674 7.61189 3.33613 0.61958 0.77255 0.64263 0.74635 11 3.39256 7.25117 1.97067 3.46712 2.76499 1.78255 3.00288 2.83404 3.14232 5.55584 6.29220 3.89554 2.08874 3.91330 3.86441 2.49986 3.35387 2.62632 7.68471 3.45393 13 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00070 7.65399 8.37633 0.61958 0.77255 0.07627 2.61143 12 9.03125 0.00165 9.14496 9.23767 9.76203 8.17789 9.74534 10.18815 9.42286 9.22920 10.58721 9.54527 8.81979 9.73212 9.15741 9.42691 9.45241 9.79205 10.03768 10.01024 14 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 13 2.51148 7.27088 2.54006 4.66761 6.62262 2.09994 5.91412 2.77898 4.67364 5.61081 4.39730 2.69559 6.09218 5.02909 3.37201 0.78037 3.17857 5.67959 7.78437 6.40466 15 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01406 7.75457 4.30239 0.61958 0.77255 0.48576 0.95510 14 3.02667 7.41352 8.08268 8.10524 8.40884 0.15947 8.48134 7.90943 7.76146 7.62021 8.33482 7.18068 7.10297 7.93498 3.29464 5.72191 6.10359 2.97566 9.71802 8.76905 16 G - - - 2.68766 4.42373 2.77667 2.73271 3.46502 2.40198 3.72642 3.28931 2.67888 2.69503 4.24837 2.89328 2.73887 3.18294 2.89948 2.38034 2.77667 2.98259 4.58625 3.61651 0.12359 2.15379 8.46350 0.69169 0.69461 0.27695 1.41919 15 3.11857 7.34726 3.43568 2.54405 6.69286 5.60896 3.40921 3.68212 2.85389 3.36008 3.73449 2.45968 4.09866 3.13266 2.63370 1.61769 1.77448 2.68582 7.77962 4.50784 19 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 16 4.83799 7.34609 2.04950 3.69006 3.06264 3.18616 5.79917 4.13391 4.53459 5.65087 6.38711 1.24250 6.00529 3.32996 3.00743 1.76084 2.17579 5.73610 7.77945 3.01215 20 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 17 2.33804 7.34566 5.08495 3.16909 6.69043 1.40681 5.79679 6.17614 2.98977 3.26042 6.38642 3.74240 1.53904 2.83009 2.43987 3.80855 3.12695 2.80777 7.77852 6.36781 21 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01443 7.75457 4.27590 0.61958 0.77255 0.48576 0.95510 18 4.84885 7.36461 2.97171 1.84814 6.71065 1.74709 5.80643 6.19817 2.53480 5.67014 6.40557 1.68897 6.01152 2.37068 2.24211 2.28429 3.73201 5.75588 7.79602 6.38301 22 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.74078 8.46313 0.61958 0.77255 0.27376 1.42926 19 6.44512 9.35223 0.71926 2.63399 8.55789 2.17230 3.52801 8.19966 2.94543 7.59825 8.55843 1.69580 7.12553 6.30718 7.20117 2.92614 6.77975 7.68588 9.74821 8.04211 23 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 20 1.75800 6.52404 7.15569 6.54977 4.09285 3.47586 6.71474 1.37972 6.33889 3.60889 5.65756 6.52819 6.71569 6.47259 6.34738 2.94922 3.18155 0.94659 7.20072 6.02273 24 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 21 9.03125 0.00165 9.14496 9.23767 9.76203 8.17789 9.74534 10.18815 9.42286 9.22920 10.58721 9.54527 8.81979 9.73212 9.15741 9.42691 9.45241 9.79205 10.03768 10.01024 25 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 22 0.60193 7.35904 8.16282 8.11730 7.88289 6.27243 8.42864 6.53688 7.92226 3.64885 7.78377 7.22175 7.13557 7.95274 7.82133 3.50972 3.40475 1.03683 9.40099 8.35331 26 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 23 0.77215 7.17783 5.80882 5.25264 6.64845 3.12506 6.36449 6.05445 2.59395 4.14795 6.50578 5.69396 6.41904 5.54340 2.86812 2.55964 1.55099 3.47628 7.93226 6.64422 27 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00064 7.75457 8.47691 0.61958 0.77255 0.48576 0.95510 24 8.00193 3.79242 8.63289 8.70852 3.69385 8.26521 6.78266 7.54391 8.46780 6.57138 8.01610 7.75468 8.51332 7.97374 8.16552 7.71713 8.18510 7.51937 6.84314 0.05715 28 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00043 7.75436 * 0.61958 0.77255 0.00000 * //