Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype13d.hmm @ 23:99cdfbd01d97 draft
Uploaded
| author | johnheap |
|---|---|
| date | Tue, 04 Jun 2019 18:02:41 -0400 |
| parents | 36cb22bd911d |
| children |
line wrap: on
line source
HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype14.5.1 LENG 20 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Jul 28 15:11:41 2015 NSEQ 3 EFFN 3.000000 CKSUM 1974769037 STATS LOCAL MSV -6.2417 0.72590 STATS LOCAL VITERBI -6.4613 0.72590 STATS LOCAL FORWARD -3.8234 0.72590 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.09939 5.34179 3.56833 2.56615 5.15587 2.75704 3.98798 3.72583 2.63739 4.20631 5.22984 3.16584 1.72039 4.27391 2.49511 2.00840 1.88271 3.49221 6.38113 5.23487 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.00000 * 1 4.61481 6.07111 5.30731 5.32973 6.09810 4.70884 6.20185 6.06257 5.49846 5.48299 6.63431 5.51390 0.08208 5.83390 5.52536 4.83363 5.12935 5.56226 6.87226 6.25948 1 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 2 4.39942 6.12840 4.64246 4.17909 5.79396 4.61603 4.88629 5.35693 0.20070 4.71863 5.71531 4.51427 5.11690 4.08594 3.28682 4.43275 4.61403 5.03784 6.46104 5.51309 2 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 3 2.93229 4.87523 4.21430 4.09482 5.33356 3.60244 5.19534 4.88225 4.26040 4.53422 5.33819 4.12587 0.85235 4.50786 4.50678 1.15285 3.47765 4.13495 6.63303 5.46413 3 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 4 4.63269 6.17031 5.23627 4.65723 5.83104 4.75957 5.16203 5.57076 3.40946 4.88757 5.93594 4.90413 5.28406 4.40770 0.15346 4.72514 4.87591 5.25930 6.52707 5.64972 4 R - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 5 3.13756 4.76435 4.93159 4.57526 4.38750 4.06107 5.27808 2.73098 4.45087 3.14279 4.27350 4.53983 4.72437 4.72802 4.61863 3.51719 0.97725 1.17836 6.08623 4.88825 5 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 6 3.08109 5.36914 3.32462 2.87673 4.90492 3.76162 4.07678 4.36262 2.69790 3.85989 4.65119 1.54805 4.24165 3.20539 1.71503 1.68970 3.35391 3.93342 5.97504 4.64483 6 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 7 3.27344 5.30033 4.02344 3.51231 5.14381 3.91836 4.40301 4.60705 2.79733 4.10434 4.95627 3.83310 4.49160 3.56951 0.91699 1.33025 3.62154 4.14648 6.14089 4.94626 7 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 8 3.20488 5.08928 4.55393 4.52410 5.40775 3.81848 5.51279 5.14253 4.68514 4.79455 5.67446 4.46164 4.64594 4.93377 4.83796 0.22583 3.76883 4.40181 6.67484 5.53906 8 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 9 3.42384 5.23617 4.84601 4.77568 5.39247 4.01365 5.64153 4.72950 4.75585 4.52264 5.55782 4.69647 4.81267 5.08969 4.87301 3.64217 0.20934 4.25217 6.65833 5.63018 9 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 10 4.61481 6.07111 5.30731 5.32973 6.09810 4.70884 6.20185 6.06257 5.49846 5.48299 6.63431 5.51390 0.08208 5.83390 5.52536 4.83363 5.12935 5.56226 6.87226 6.25948 10 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 11 1.09076 4.80156 4.58825 4.51156 5.45939 0.78639 5.44598 4.92732 4.65659 4.63616 5.42378 4.28900 4.42148 4.81832 4.80337 3.09030 3.45565 4.12335 6.76599 5.69928 11 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 12 3.76669 6.02773 1.32621 3.05792 5.82002 0.68540 4.81803 5.47808 4.03112 4.96005 5.88171 3.61809 4.67033 4.04249 4.66222 3.70994 4.17022 4.91686 6.91551 5.55363 12 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 13 4.61481 6.07111 5.30731 5.32973 6.09810 4.70884 6.20185 6.06257 5.49846 5.48299 6.63431 5.51390 0.08208 5.83390 5.52536 4.83363 5.12935 5.56226 6.87226 6.25948 13 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 14 3.20488 5.08928 4.55393 4.52410 5.40775 3.81848 5.51279 5.14253 4.68514 4.79455 5.67446 4.46164 4.64594 4.93377 4.83796 0.22583 3.76883 4.40181 6.67484 5.53906 14 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 15 3.50003 5.91709 3.10752 0.97437 5.33100 3.93150 4.20296 4.77826 1.30024 4.20360 5.04085 3.41027 4.44134 3.34032 3.10962 3.42009 3.73005 4.37545 6.25707 4.93044 15 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 16 3.31622 4.81296 4.99547 4.57967 4.15273 4.36776 5.25550 1.21591 4.43038 2.82051 4.02519 4.66967 4.90293 4.72427 4.60360 3.79818 1.03988 2.34253 5.93481 4.73045 16 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 17 3.58225 5.80439 3.13467 3.03424 4.53192 3.95513 1.38161 4.83099 3.27733 4.28753 5.20700 0.93310 4.56079 3.67401 3.65682 3.54143 3.89269 4.43035 5.92171 4.37378 17 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 18 2.97326 4.88448 4.35407 4.16776 5.17734 3.66022 5.17235 4.57145 4.19442 4.28924 5.15624 4.18536 1.26457 4.49575 4.42368 3.16924 0.81327 3.98163 6.50276 5.36060 18 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 19 3.42384 5.23617 4.84601 4.77568 5.39247 4.01365 5.64153 4.72950 4.75585 4.52264 5.55782 4.69647 4.81267 5.08969 4.87301 3.64217 0.20934 4.25217 6.65833 5.63018 19 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01083 4.92694 5.64929 0.61958 0.77255 0.48576 0.95510 20 4.41353 6.36850 3.55766 0.17446 5.94872 4.38487 5.21442 5.70456 4.29834 5.15447 6.21155 4.15585 5.06174 4.48988 4.73891 4.34638 4.76278 5.30888 6.85038 5.78836 20 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00730 4.92341 * 0.61958 0.77255 0.00000 * //