Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype5.hmm @ 23:99cdfbd01d97 draft
Uploaded
| author | johnheap |
|---|---|
| date | Tue, 04 Jun 2019 18:02:41 -0400 |
| parents | 36cb22bd911d |
| children |
line wrap: on
line source
HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype5.2 LENG 17 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Fri Jul 24 12:50:31 2015 NSEQ 63 EFFN 63.000000 CKSUM 1499272824 STATS LOCAL MSV -6.2169 0.72230 STATS LOCAL VITERBI -6.1259 0.72230 STATS LOCAL FORWARD -4.3041 0.72230 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 1.40242 5.95102 4.92048 5.84833 4.50325 4.76877 2.50996 4.21809 2.82338 2.82016 5.19353 2.69950 3.29337 4.20595 2.10030 3.34533 2.41821 4.54989 3.49955 2.36130 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.00000 * 1 0.43150 7.39122 3.86544 8.00906 8.36658 3.74467 8.48828 7.89232 7.97237 7.58891 8.29988 7.14796 7.08190 7.96030 7.87411 3.75835 1.65954 2.44322 9.70678 8.74052 1 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 2 0.27866 7.38806 8.09070 8.15583 8.39477 6.18891 8.52637 7.92207 8.01622 7.62227 8.32567 3.26974 3.11921 8.00764 7.88969 5.69618 2.01566 3.99702 9.73131 8.78042 2 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 3 7.15192 8.87662 8.27831 6.86962 8.74942 7.41811 7.09452 7.93226 0.08661 7.14048 8.09409 7.04120 7.71648 6.23138 2.63235 7.12013 7.15356 7.66978 8.92883 8.05259 3 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 4 7.00767 8.75900 8.14157 6.82970 7.95782 7.33474 3.31719 7.83399 5.08904 7.03546 3.72459 6.98502 7.66231 6.20931 0.08082 6.99420 7.06369 7.56551 8.69846 7.55484 4 R - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 5 7.36213 8.38667 9.33357 8.74332 2.68362 8.99253 8.98728 5.39170 8.64830 0.19818 2.85439 9.20178 8.50889 8.08560 3.14667 8.55010 7.50203 5.89744 8.48184 7.63907 5 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 6 3.18808 7.41119 8.16452 8.21340 8.26971 6.24384 8.56610 2.88420 8.03340 7.29157 8.17147 7.23007 7.13200 8.04878 7.91220 5.75329 0.11551 6.50430 9.70840 8.73302 6 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 7 0.06090 7.45532 8.16410 8.23485 8.45735 6.25328 8.58787 8.01744 8.08724 7.70140 8.40801 7.24765 7.14629 8.08118 7.95112 3.01831 6.15302 6.96151 9.75662 8.83693 7 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 8 8.00244 8.73980 8.59917 8.67478 3.41073 8.27066 2.87943 7.50793 8.43390 6.53465 7.98002 3.47059 8.49908 7.93478 8.13261 7.69747 8.17109 7.48601 6.79962 0.13607 8 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 9 6.30284 8.73339 3.40451 5.44535 8.64864 6.41137 7.34395 8.32313 6.70868 7.76557 8.71954 0.24577 7.18784 6.56559 7.51309 1.77684 6.74149 7.64279 9.86997 8.25106 9 N - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 10 0.14510 7.38579 8.18144 8.24920 8.40678 3.30767 8.54824 7.92945 8.04858 7.63587 8.33618 7.18980 7.08513 8.03565 7.90457 5.69523 2.67190 3.88698 9.74251 8.80002 10 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 11 0.13614 7.43156 3.25147 7.56400 8.41453 6.19966 8.40733 7.94205 7.87921 7.63811 8.35188 7.05619 7.08946 7.84013 7.87021 2.88721 6.10762 3.77760 9.74620 8.74785 11 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 12 6.37779 8.44626 7.03092 3.63943 8.11098 3.55903 6.61253 7.33237 3.62368 3.97398 7.51080 6.37893 7.19551 2.99104 1.26858 3.02362 6.45904 7.02127 0.67612 7.49386 12 W - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 13 6.33527 8.24204 7.74598 6.56315 8.37302 3.31897 6.87977 4.11809 3.10213 6.86038 7.76634 6.69382 7.32506 6.01443 0.35525 2.02886 2.85080 7.15692 8.76203 7.79335 13 R - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 14 7.50039 8.45869 8.45809 8.38109 3.98571 8.05210 0.86070 2.88782 8.12587 2.83651 7.64563 2.63586 8.30776 3.05980 7.91242 7.45173 7.69389 7.03551 6.80957 1.14024 14 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 15 5.43381 7.98579 3.70254 4.88550 7.32033 5.99339 0.69866 6.82396 5.07941 6.27807 7.04932 2.13467 2.33661 2.29835 3.10411 3.09746 5.67804 6.37956 8.39122 3.17301 15 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 16 3.94097 6.42152 6.70944 6.11005 3.28195 6.14064 2.30811 4.07243 5.94658 2.54222 5.53877 6.21432 0.89968 3.14507 4.40470 4.29369 1.86581 4.67129 7.03821 2.39222 16 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00065 7.73902 8.46137 0.61958 0.77255 0.48576 0.95510 17 3.64706 3.29724 6.96265 6.34966 3.60335 6.18588 1.32690 2.34863 6.13887 3.60724 5.51679 2.39217 2.58477 6.27315 6.15376 3.00556 5.25210 4.64509 7.01019 1.29190 17 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 7.73881 * 0.61958 0.77255 0.00000 * //