Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype10a.hmm @ 9:a0d5e1f5bec0 draft
Uploaded
| author | johnheap |
|---|---|
| date | Mon, 03 Jun 2019 14:09:49 -0400 |
| parents | 36cb22bd911d |
| children |
line wrap: on
line source
HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype11.1 LENG 22 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Mon Jul 27 12:46:46 2015 NSEQ 26 EFFN 26.000000 CKSUM 2826442667 STATS LOCAL MSV -6.4416 0.72805 STATS LOCAL VITERBI -6.8167 0.72805 STATS LOCAL FORWARD -4.0569 0.72805 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.06327 5.61197 3.20857 1.95192 3.36719 3.31898 4.59546 3.15778 2.57118 2.87003 5.21024 2.79906 2.38430 3.20490 3.59390 2.14827 2.10886 3.45134 6.69535 4.32584 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.10326 6.87243 2.33235 0.61958 0.77255 0.00000 * 1 5.65297 7.62461 6.51373 5.34808 7.37382 6.11256 5.74560 6.53337 0.88866 5.78505 6.69743 5.59873 2.55448 1.08012 2.45930 5.60677 2.93858 6.24467 7.67565 6.67931 1 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.22721 6.77088 1.59899 0.61958 0.77255 1.50497 0.25106 2 0.87973 6.95399 2.58458 2.57014 6.30997 2.89638 5.29946 5.82188 4.17049 5.28925 6.06439 4.37500 5.43263 2.61982 4.71608 4.31722 1.49401 5.36556 7.42420 5.95859 2 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00214 6.54581 7.26815 0.61958 0.77255 0.06504 2.76509 3 2.94588 8.06477 2.04308 0.38473 7.34971 5.46358 6.07652 6.92113 2.98172 6.35809 7.23195 4.90527 6.13099 5.24870 5.85218 5.15879 5.62931 3.05157 8.50078 6.90607 3 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 4 5.69418 8.66715 0.74502 0.92240 7.84815 5.57181 6.32655 7.52473 5.68531 6.90698 7.92280 2.32921 6.32124 5.53326 6.57239 5.45007 6.04516 6.99425 9.05931 7.30130 4 d - - - 2.68470 4.42348 2.77438 2.73246 3.46477 2.40636 3.72617 3.29477 2.67487 2.69478 4.24813 2.90470 2.73863 3.18269 2.89603 2.37749 2.77642 2.98641 4.58600 3.60732 0.50813 1.13221 2.57626 0.36158 1.19262 0.48576 0.95510 5 4.13408 6.06642 4.79037 4.25097 5.31519 5.01161 5.33204 4.69632 4.23324 2.87625 5.23171 1.67562 1.20866 3.00048 4.64508 2.33094 2.16901 2.35354 6.68996 5.41781 7 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00167 6.79387 7.51622 0.61958 0.77255 0.17588 1.82459 6 4.23507 5.61367 6.16997 2.50229 2.81150 5.40234 5.73533 2.09326 5.34895 1.06600 4.73059 5.55538 2.03096 5.48563 5.36763 2.44691 3.37854 2.57769 6.23708 5.06062 8 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 7 2.63354 6.67206 4.90081 4.39906 6.44154 5.13056 5.61159 5.91451 2.35473 5.40994 6.16299 4.86691 0.75093 2.12201 4.71998 2.20306 2.71955 5.39866 7.52834 6.18349 9 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 8 2.20507 5.63293 5.96592 5.36503 4.73005 5.36281 3.11440 2.82160 5.19573 2.82153 4.75148 3.08345 2.80618 5.36746 5.28083 3.13570 1.72384 1.07362 6.25216 5.07054 10 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 9 4.18121 6.24866 4.69148 4.15306 5.51729 5.02271 5.30296 3.47907 4.14071 2.97604 5.39229 2.44699 0.97980 2.10834 4.57906 1.99737 2.34620 4.61312 6.83516 5.53194 11 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.09606 6.87243 2.40181 0.61958 0.77255 0.48576 0.95510 10 2.90537 8.41824 2.17941 0.31764 7.72397 2.64516 6.23600 7.38934 5.58077 6.78268 7.78032 4.91650 6.21853 5.44188 6.44561 5.32850 5.90890 6.84341 8.93455 7.19791 12 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00169 6.77807 7.50041 0.61958 0.77255 1.46091 0.26400 11 4.09552 6.13247 4.62050 4.06677 5.35455 4.95343 5.19059 4.75300 4.02022 2.29282 5.24245 1.09416 2.17460 4.38285 2.85050 2.66748 1.98111 4.46539 6.68244 2.73140 13 n - - - 2.68725 4.42332 2.77313 2.73230 3.46461 2.40619 3.72601 3.29461 2.67847 2.69462 4.24796 2.88871 2.73846 3.18253 2.89907 2.37994 2.77626 2.98625 4.58584 3.61610 0.57888 0.82343 7.50041 0.01220 4.41258 0.15679 1.93024 12 6.35931 8.52776 5.19380 0.07508 8.18430 6.21295 6.91874 7.92470 3.04451 7.21670 8.25886 5.83137 6.90090 6.15075 6.16111 6.19797 6.67490 7.46882 8.89872 7.78651 15 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 13 2.60071 6.62654 7.23431 7.30043 7.59597 5.42179 7.72203 7.12934 7.18827 6.83049 7.55833 6.39979 6.31178 7.21062 7.07518 4.94297 0.10576 6.11218 8.88805 7.96500 16 T - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 14 4.91320 6.84023 6.18137 6.26971 7.59137 5.53926 7.46197 7.30544 6.84104 6.93084 7.69736 2.60085 6.40646 6.86384 6.98828 0.11076 5.50329 6.31072 8.84720 7.77152 17 S - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 15 1.83092 6.62267 6.03988 2.16082 7.45023 0.63167 7.18305 6.98562 6.42235 6.62902 7.36070 5.94974 6.19144 6.50114 6.65692 2.53655 2.36854 6.03254 8.74696 7.63181 18 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 16 4.22173 3.21992 5.39738 3.16881 2.55201 5.24231 5.58698 4.31908 4.76997 2.37256 4.96066 3.02838 5.64795 5.03334 5.04343 0.86329 1.71613 4.10626 6.44761 5.23830 19 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 17 4.98671 6.30702 6.80349 6.29075 0.65017 6.07936 5.87845 3.07210 6.07260 2.06693 5.34971 6.11958 2.77229 6.10058 6.03636 2.41741 5.21544 4.56795 6.12547 2.25485 20 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 18 4.25097 5.63142 6.18020 5.56720 4.71773 5.41572 5.75071 1.09710 5.35231 1.19087 3.08323 5.56829 3.19460 5.49526 2.78275 2.54382 2.93735 3.86935 6.25397 5.07887 21 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 19 4.62307 6.71355 5.20113 4.74720 6.43279 5.33061 5.84820 2.37152 1.63527 5.40711 6.22906 1.93662 5.88484 5.01058 4.77538 2.75366 0.82517 5.40137 7.58096 6.31975 22 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 20 4.13052 6.40564 4.46722 2.82325 5.67134 4.93536 5.13785 1.71625 3.90877 4.67723 5.47458 1.83868 5.33082 4.27283 2.55736 1.18350 2.92282 4.75456 6.89246 2.87093 23 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 21 4.30961 6.49895 4.71927 4.13967 3.29539 5.11326 2.29576 5.17155 2.19842 3.09409 5.57119 4.64088 0.98076 1.97302 4.31288 4.33828 2.42860 4.84962 6.95294 5.63795 24 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00154 6.87243 7.59478 0.61958 0.77255 0.48576 0.95510 22 5.97874 7.83248 7.05178 5.66150 7.66151 6.35084 5.91002 6.75778 0.42054 5.97441 6.91389 2.25427 6.61000 5.03430 1.58249 5.92833 5.97051 6.49705 7.83494 6.89157 25 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00104 6.87193 * 0.61958 0.77255 0.00000 * //