Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype10b.hmm @ 9:a0d5e1f5bec0 draft
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| author | johnheap |
|---|---|
| date | Mon, 03 Jun 2019 14:09:49 -0400 |
| parents | 36cb22bd911d |
| children |
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HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype11.2 LENG 21 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Mon Jul 27 12:54:16 2015 NSEQ 4 EFFN 4.000000 CKSUM 2929604314 STATS LOCAL MSV -6.5951 0.73266 STATS LOCAL VITERBI -7.0599 0.73266 STATS LOCAL FORWARD -3.2356 0.73266 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.53878 5.63240 3.38445 1.89488 5.29210 4.00484 4.04242 4.80347 1.63923 4.30404 4.17394 3.51107 1.80774 2.74018 3.00246 2.79368 2.80467 3.73917 6.34251 5.14880 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.00000 * 1 3.22283 5.12565 4.72960 4.63185 5.58865 3.89104 5.59653 5.02640 4.68371 4.73574 5.59690 4.53027 0.59806 4.95906 4.85276 3.42630 1.36853 4.34589 6.88513 5.79956 1 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 2 4.10941 6.12665 4.56979 3.80220 5.72394 4.57806 4.40740 5.06368 2.53834 4.37145 5.28266 4.12541 4.93385 0.87659 1.09975 4.08121 4.22590 4.75229 6.28496 5.21153 2 q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 3 4.81271 6.44149 5.07288 4.60759 6.17405 4.93894 5.25639 5.79217 0.13196 5.11184 6.12690 4.92115 5.45017 4.46991 3.63257 4.85607 5.02597 5.46942 6.76991 5.89471 3 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 4 0.13884 5.37390 5.28464 5.28248 5.84631 4.14753 6.05100 5.27079 5.34307 5.03692 5.98543 4.97628 4.98417 5.54403 5.37783 3.75834 4.11404 4.61881 7.04944 6.11806 4 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 5 3.14412 5.07634 4.56601 4.50149 5.66081 3.81102 5.55908 5.23887 4.69279 4.89093 5.68207 4.42913 0.77362 4.90433 4.88873 1.06248 3.70910 4.41426 6.95252 5.82569 5 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.29648 5.15864 1.38301 0.61958 0.77255 0.48576 0.95510 6 3.09193 5.22779 3.33730 3.08087 4.95727 3.69948 4.36277 4.50462 3.10531 4.04746 4.87871 3.52432 4.31906 1.37101 3.46898 1.03560 3.46313 4.02086 6.15146 4.81366 6 s - - - 2.68634 4.42241 2.77536 2.73139 3.46370 2.40529 3.72511 3.29370 2.67757 2.69371 4.24706 2.90363 2.73504 3.18162 2.89817 2.37903 2.77536 2.98534 4.58493 3.61519 0.61460 0.78652 5.59593 0.07199 2.66705 0.23757 1.55373 7 4.84589 6.68580 3.93942 0.11168 6.34286 4.72455 5.62542 6.19623 4.77114 5.59581 6.69205 4.56014 5.41056 4.93081 5.20012 4.78150 5.20758 5.78581 7.15932 6.20155 8 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 8 3.97449 5.98627 4.20789 3.80028 5.73989 4.42938 4.71917 5.18113 0.74434 4.58811 5.48621 4.18775 1.20289 3.88119 3.23838 3.99912 4.24114 4.78209 6.51022 5.41218 9 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 9 3.78175 5.76993 4.46052 3.62694 5.21901 4.43099 4.28875 4.44167 1.36704 3.97621 4.87109 3.97487 4.76320 3.43107 1.40594 3.81066 3.92591 1.36371 6.06446 4.94101 10 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 10 3.13312 5.19492 3.69842 3.46030 5.22581 3.79152 4.75558 4.68984 3.65455 4.29872 5.10347 1.55867 1.58815 3.95392 4.05938 3.24453 1.23733 4.13551 6.48014 5.18558 11 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 11 3.18148 5.47895 3.23154 1.29490 5.08151 3.80845 4.32020 4.54879 3.15764 4.08799 4.87476 3.45486 4.36150 3.46171 3.64323 1.60760 1.64481 4.08877 6.25571 4.86862 12 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 12 3.62986 6.21917 1.44366 2.81529 5.56317 3.93057 4.46564 5.10973 3.45050 4.57182 5.40527 3.40021 1.34576 1.55759 4.03181 3.51600 3.92083 4.64943 6.70387 5.19469 13 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 13 3.57510 5.85803 3.15836 0.67659 5.47962 3.98005 4.63618 4.91420 3.56460 4.49708 5.36702 3.61562 4.62209 3.81475 4.04996 3.55287 1.55337 4.47184 6.65810 5.26025 14 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 14 3.97792 5.99445 4.22139 3.79355 5.74091 4.43550 4.69452 5.17283 0.59631 4.57314 5.47017 4.17915 1.50645 3.85335 3.19752 3.99866 4.23545 4.77840 6.49517 5.39854 15 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 15 4.05217 6.26650 3.35146 1.33360 5.93062 4.24725 5.01284 5.54601 4.03927 5.02772 5.95938 3.91509 0.61324 4.22966 4.53013 3.99764 4.41698 5.06902 6.97884 5.68973 16 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 16 1.29490 5.31483 3.69525 3.24946 5.05588 3.87579 4.40205 4.47702 1.53952 4.03372 4.84003 3.67931 1.69902 3.55312 3.39597 3.23792 3.51042 4.02589 6.19039 4.90395 17 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 17 3.78614 6.21128 3.23804 0.70777 5.63988 4.13172 4.45052 5.09834 1.45673 4.50678 5.36377 3.61197 4.67390 3.59635 3.36595 3.68960 4.02308 4.69130 6.54050 5.21441 18 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 18 3.25255 5.35850 3.35014 1.59446 4.61705 3.93659 4.31069 4.00086 3.14542 3.59144 1.48759 3.53979 1.77087 3.49726 3.57039 3.30125 3.51942 3.71532 5.94233 4.62365 19 m - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 19 3.57504 5.82296 3.71610 3.22996 5.22265 4.17329 1.70595 4.68908 1.42342 4.12269 4.96036 3.69459 1.41618 3.39372 2.92305 3.54873 3.77885 4.32131 6.14470 4.88456 20 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 20 3.47309 5.98891 3.00343 1.48897 5.34307 3.92020 4.32051 4.84343 3.13787 4.30960 5.11686 3.39273 1.41679 1.60150 3.61712 3.39070 3.73506 4.40917 6.43353 4.99665 21 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00858 5.15864 5.88099 0.61958 0.77255 0.48576 0.95510 21 4.81271 6.44149 5.07288 4.60759 6.17405 4.93894 5.25639 5.79217 0.13196 5.11184 6.12690 4.92115 5.45017 4.46991 3.63257 4.85607 5.02597 5.46942 6.76991 5.89471 22 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00578 5.15585 * 0.61958 0.77255 0.00000 * //