Mercurial > repos > johnheap > vapper
view data/Motifs/Phylotype9b.hmm @ 11:c4463e84a7ea draft
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| author | johnheap |
|---|---|
| date | Mon, 03 Jun 2019 14:12:06 -0400 |
| parents | 36cb22bd911d |
| children |
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HMMER3/f [hmmer3.1-snap20121016 | October 2012] NAME Phylotype8.2 LENG 34 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Thu Jul 30 10:00:39 2015 NSEQ 4 EFFN 2.035156 CKSUM 3090411652 STATS LOCAL MSV -7.3255 0.71968 STATS LOCAL VITERBI -7.4015 0.71968 STATS LOCAL FORWARD -4.0363 0.71968 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.75651 5.31011 2.65808 1.71102 3.09657 2.79636 3.70526 3.23486 3.01315 2.25940 3.95578 3.24957 4.46668 2.84659 3.12179 3.01381 3.73807 2.95068 5.00897 2.92599 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.00000 * 1 4.50533 5.67950 5.04591 4.95967 2.72587 4.78231 4.23763 4.44572 4.81206 3.69074 5.03928 4.77514 5.25838 4.91037 4.81427 4.54196 4.80565 4.35505 4.38011 0.27554 1 Y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 2 3.90476 5.96930 3.14040 0.30121 5.46201 3.99187 4.73384 5.10868 3.74557 4.61288 5.62639 3.70068 4.65014 3.97900 4.18980 3.84212 4.23709 4.73273 6.45972 5.29239 2 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 3 1.17797 5.29703 1.25685 2.71616 5.00771 3.53158 4.28177 4.43551 3.29853 4.06195 4.91745 3.23741 4.19406 3.46978 3.83258 3.08318 3.44798 3.97371 6.24981 4.84789 3 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 4 3.82466 5.03856 5.71985 5.19290 3.51016 5.25860 5.65555 1.16818 5.04691 0.88772 3.26677 5.39865 5.34883 5.05151 5.07206 4.67640 4.05099 2.34255 5.72538 4.69140 4 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 5 3.33008 5.49676 3.22613 2.91942 4.29564 3.84881 1.06144 4.32113 2.62191 3.77670 4.68144 3.40042 4.33261 1.81442 2.90533 3.30889 3.56373 3.99048 5.57967 4.12761 5 h - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 6 3.53988 5.57399 3.98183 3.29508 4.74279 4.09602 1.94937 4.43645 2.25307 3.83131 4.73241 3.65935 4.46926 3.16812 0.83928 3.53555 3.69699 4.12768 5.70034 4.45352 6 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 7 3.90476 5.96930 3.14040 0.30121 5.46201 3.99187 4.73384 5.10868 3.74557 4.61288 5.62639 3.70068 4.65014 3.97900 4.18980 3.84212 4.23709 4.73273 6.45972 5.29239 7 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 8 3.60573 4.87730 5.45636 4.95120 3.62456 4.96133 5.46542 2.21379 4.80103 0.98324 3.41395 5.11737 5.19039 4.92793 4.88642 4.36922 3.85716 1.14552 5.71966 4.60703 8 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 9 3.90476 5.96930 3.14040 0.30121 5.46201 3.99187 4.73384 5.10868 3.74557 4.61288 5.62639 3.70068 4.65014 3.97900 4.18980 3.84212 4.23709 4.73273 6.45972 5.29239 9 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 10 3.32840 5.07343 3.95056 3.72806 3.35059 1.09609 4.34727 4.03306 3.79438 3.59071 4.61433 3.99000 4.56058 4.08684 4.06137 3.47746 3.70429 3.74277 4.93454 1.18626 10 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 11 4.14507 5.41322 5.42040 5.11989 3.62930 4.95349 5.55974 2.91515 4.89873 0.30223 3.50899 5.33807 5.29505 5.06376 4.92623 4.71925 4.42102 3.13767 5.71346 4.59670 11 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 12 3.48644 6.21403 1.02520 1.14838 5.48265 3.58964 4.22673 5.06930 3.36917 4.51295 5.40733 3.03625 4.26843 3.40703 4.05698 3.31561 3.79764 4.59465 6.64347 5.05334 12 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 13 3.22454 5.29926 3.73805 3.05134 4.42432 3.93498 3.89457 4.01033 2.28264 3.50929 4.38216 3.46895 4.29028 1.90998 1.35834 3.24832 3.40390 3.71498 2.21689 4.24822 13 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 14 3.03723 5.49295 2.97781 1.45751 4.86635 3.65439 3.85239 4.31954 1.72209 3.76864 4.55422 3.12026 4.09660 1.95303 2.84554 2.98209 3.26077 3.90559 5.86394 4.50542 14 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 15 3.49296 4.89645 5.15437 4.89524 4.26038 4.49403 5.61767 2.33048 4.78845 2.84466 4.15493 4.95807 5.05326 5.11758 4.92589 4.09368 3.85981 0.40554 6.14754 4.91302 15 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 16 3.04104 5.56895 1.47595 2.47742 4.90273 3.58053 3.90296 4.39394 1.79369 3.85871 4.64162 3.04007 4.07850 1.94715 3.15373 2.96845 3.28686 3.96138 5.98136 4.55420 16 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 17 1.09586 4.80564 3.36632 3.17713 4.81564 3.42962 4.46997 4.25426 3.40601 3.92706 4.76259 1.33806 4.14303 3.69586 3.78893 2.91006 3.23700 3.72692 6.11262 4.82088 17 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 18 3.82466 5.03856 5.71985 5.19290 3.51016 5.25860 5.65555 1.16818 5.04691 0.88772 3.26677 5.39865 5.34883 5.05151 5.07206 4.67640 4.05099 2.34255 5.72538 4.69140 18 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 19 2.64990 4.60308 3.91324 3.77712 5.08821 1.18933 4.90491 4.60772 3.98129 4.26193 5.04926 3.82974 4.14063 4.20179 4.25327 0.98585 3.19156 3.85606 6.38748 5.21635 19 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 20 3.45919 5.64249 3.93460 3.15056 5.19839 4.05738 3.89720 4.50117 1.15739 3.85066 4.70593 3.53931 4.38671 1.80917 1.55769 3.42166 3.59198 4.16082 5.82655 4.69265 20 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 21 4.03039 6.07955 0.25574 3.14787 5.61212 3.99835 4.86767 5.42339 4.12479 4.89811 5.95030 3.72335 4.69971 4.14610 4.69729 3.94506 4.40022 4.99508 6.59144 5.43546 21 D - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 22 3.97335 5.21084 5.71038 5.15050 3.33001 5.28255 5.54867 2.57250 4.95385 0.78283 1.34247 5.39674 5.32136 4.90687 4.95006 4.68903 4.17862 2.85018 5.57257 4.59478 22 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 23 3.90476 5.96930 3.14040 0.30121 5.46201 3.99187 4.73384 5.10868 3.74557 4.61288 5.62639 3.70068 4.65014 3.97900 4.18980 3.84212 4.23709 4.73273 6.45972 5.29239 23 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 24 3.90476 5.96930 3.14040 0.30121 5.46201 3.99187 4.73384 5.10868 3.74557 4.61288 5.62639 3.70068 4.65014 3.97900 4.18980 3.84212 4.23709 4.73273 6.45972 5.29239 24 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 25 1.25569 5.23112 2.89396 1.31709 4.80588 3.55886 4.15134 4.19000 3.03623 3.81889 4.66767 3.22686 4.15529 3.32277 3.50546 3.02916 3.34482 3.78516 6.03264 4.66481 25 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 26 4.40946 5.59333 5.31808 5.22047 0.29246 4.79884 4.46299 3.92394 5.13218 3.13315 4.55970 4.98117 5.27559 5.10104 5.06171 4.59778 4.72801 3.96015 4.58263 2.89513 26 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 27 3.90476 5.96930 3.14040 0.30121 5.46201 3.99187 4.73384 5.10868 3.74557 4.61288 5.62639 3.70068 4.65014 3.97900 4.18980 3.84212 4.23709 4.73273 6.45972 5.29239 27 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 28 3.19611 5.14917 3.25254 1.27085 4.10599 3.86452 4.22318 3.38257 3.07197 1.37679 4.03779 3.48133 4.34273 3.44662 3.45252 3.28758 3.45115 3.25274 5.63747 4.34093 28 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 29 0.96601 4.50737 4.18293 3.94878 4.93778 3.29367 4.91218 4.36008 3.98792 4.07373 4.87770 3.88108 4.10494 4.22621 4.22656 1.13128 3.11465 3.68496 6.28414 5.12540 29 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 30 3.86304 5.49875 4.67836 4.69146 5.70193 0.14811 5.69263 5.55305 4.96574 5.07309 6.09831 4.84625 4.90022 5.23113 5.05706 4.06472 4.39539 4.93648 6.53397 5.84965 30 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 31 3.99399 5.21392 5.59441 5.13994 1.15351 5.14246 4.83370 2.77102 4.97295 0.94348 3.29269 5.13324 5.27476 4.86667 4.93212 4.55113 4.20571 3.00496 4.91007 3.41184 31 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 32 2.93989 5.30603 2.98558 2.60169 4.73974 3.59015 3.88907 4.20177 1.77447 3.70101 4.48845 1.60282 4.06371 3.01546 2.99294 1.93432 3.19698 3.78403 5.83290 4.46681 32 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 33 3.59973 5.31981 3.75190 3.54837 2.81003 4.17937 3.99695 4.05812 3.62591 3.49291 4.60005 1.80472 4.67743 3.91981 3.91424 3.64374 3.88636 3.83939 4.44606 0.81250 33 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01449 4.63716 5.35950 0.61958 0.77255 0.48576 0.95510 34 3.82552 5.67755 3.74057 3.57568 4.96574 4.11164 4.71202 4.80559 3.35708 4.21274 5.28440 4.01762 4.71429 0.33396 3.59545 3.87263 4.15382 4.49907 6.10066 4.90109 34 Q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00978 4.63244 * 0.61958 0.77255 0.00000 * //