view data/Motifs/Phylotype11a.hmm @ 30:6669fd407dc9 draft default tip

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author johnheap
date Fri, 07 Jun 2019 11:07:05 -0400
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HMMER3/f [hmmer3.1-snap20121016 | October 2012]
NAME  Phylotype12.1
LENG  24
ALPH  amino
RF    no
MM    no
CONS  yes
CS    no
MAP   yes
DATE  Wed Jul 29 11:54:06 2015
NSEQ  64
EFFN  64.000000
CKSUM 2634953749
STATS LOCAL MSV       -6.9012  0.72285
STATS LOCAL VITERBI   -7.0426  0.72285
STATS LOCAL FORWARD   -3.7767  0.72285
HMM          A        C        D        E        F        G        H        I        K        L        M        N        P        Q        R        S        T        V        W        Y   
            m->m     m->i     m->d     i->m     i->i     d->m     d->d
  COMPO   2.58914  2.48672  3.02391  3.37037  2.97905  1.76807  4.73799  3.65499  3.46769  2.94384  5.68355  2.87127  3.73673  3.95413  3.48222  2.48301  3.00258  2.88711  5.75687  2.37571
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.00000        *
      1   5.13239  6.50131  7.08484  6.48060  1.19234  2.27771  3.65701  3.66616  6.26381  2.45237  5.62157  3.52214  6.65538  6.38367  6.26566  2.31220  5.36429  3.66960  6.99986  1.28495      1 f - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
      2   2.91884  6.64402  7.21752  6.63210  0.60980  4.30821  3.68330  5.08626  6.41325  2.50873  5.76914  6.56151  6.78918  6.51574  6.40586  4.14173  5.51487  2.87611  6.97864  1.68522      2 F - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
      3   5.13643  6.50418  7.09953  6.49471  2.32016  6.30036  6.56913  3.30242  6.27675  3.60318  5.62347  3.51677  6.66246  6.39611  6.27655  3.82266  2.43208  3.31951  7.01702  0.44948      3 Y - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.02893  7.75457  3.57255  0.61958  0.77255  0.48576  0.95510
      4   7.42633  8.41472  8.81151  8.56585  2.32870  8.41244  7.31463  3.76558  8.39634  0.24829  6.29490  8.12331  8.39985  7.93066  8.14049  3.44127  7.59265  6.29506  7.31603  2.83081      4 L - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00066  7.72630  8.44864  0.61958  0.77255  0.18891  1.75943
      5   5.69242  7.59286  8.03611  8.10862  8.45367  0.10309  8.62156  8.10574  8.10375  2.85199  8.50195  7.33511  7.26377  8.12509  8.00846  3.51819  6.29723  7.09272  9.73590  8.77802      5 G - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.01120  7.75457  4.53639  0.61958  0.77255  0.48576  0.95510
      6   4.91763  7.42766  3.28771  1.82564  6.76774  0.67856  5.87104  6.25435  4.61747  5.73089  6.47192  5.13065  6.07138  2.49662  3.90940  2.45816  5.15090  4.19335  3.86377  3.58923      6 G - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.74401  8.46635  0.61958  0.77255  0.30458  1.33725
      7   4.83525  7.34845  3.17668  3.27190  6.69460  1.66286  5.79558  3.28065  2.79273  3.53772  6.38882  2.09518  2.58769  3.17677  2.87105  1.65362  2.78531  3.31147  7.78048  6.36888      7 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
      8   2.41191  7.34832  3.13024  2.17234  6.69441  1.40417  5.79562  3.91612  3.02340  4.03405  6.38871  2.23734  2.94643  4.89164  2.87708  2.55509  2.39850  3.88442  7.78039  6.36882      8 g - - -
          2.68661  4.42085  2.77982  2.73105  3.46816  2.39476  3.72957  3.29816  2.67761  2.69817  4.25152  2.90404  2.74202  3.18609  2.89623  2.38349  2.75759  2.98602  4.58939  3.61498
          0.90307  0.75917  2.06655  0.42503  1.06059  0.48576  0.95510
      9   2.94128  7.22579  2.91210  3.15980  6.57224  2.09516  5.67209  6.05919  1.95394  5.53166  6.26609  1.73168  3.39676  3.59630  2.67681  2.90408  2.35184  2.65148  3.15298  6.24586     11 n - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.07163  7.61942  2.67902  0.61958  0.77255  0.79794  0.59830
     10   2.75406  7.11248  2.92521  4.45834  3.83666  1.17116  5.70270  3.40510  2.46082  5.39828  6.16533  3.38843  5.90248  4.81596  3.10305  1.98507  2.13250  3.19187  7.57325  3.76565     12 g - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.03674  7.61189  3.33613  0.61958  0.77255  0.64263  0.74635
     11   3.39256  7.25117  1.97067  3.46712  2.76499  1.78255  3.00288  2.83404  3.14232  5.55584  6.29220  3.89554  2.08874  3.91330  3.86441  2.49986  3.35387  2.62632  7.68471  3.45393     13 g - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00070  7.65399  8.37633  0.61958  0.77255  0.07627  2.61143
     12   9.03125  0.00165  9.14496  9.23767  9.76203  8.17789  9.74534 10.18815  9.42286  9.22920 10.58721  9.54527  8.81979  9.73212  9.15741  9.42691  9.45241  9.79205 10.03768 10.01024     14 C - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     13   2.51148  7.27088  2.54006  4.66761  6.62262  2.09994  5.91412  2.77898  4.67364  5.61081  4.39730  2.69559  6.09218  5.02909  3.37201  0.78037  3.17857  5.67959  7.78437  6.40466     15 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.01406  7.75457  4.30239  0.61958  0.77255  0.48576  0.95510
     14   3.02667  7.41352  8.08268  8.10524  8.40884  0.15947  8.48134  7.90943  7.76146  7.62021  8.33482  7.18068  7.10297  7.93498  3.29464  5.72191  6.10359  2.97566  9.71802  8.76905     16 G - - -
          2.68766  4.42373  2.77667  2.73271  3.46502  2.40198  3.72642  3.28931  2.67888  2.69503  4.24837  2.89328  2.73887  3.18294  2.89948  2.38034  2.77667  2.98259  4.58625  3.61651
          0.12359  2.15379  8.46350  0.69169  0.69461  0.27695  1.41919
     15   3.11857  7.34726  3.43568  2.54405  6.69286  5.60896  3.40921  3.68212  2.85389  3.36008  3.73449  2.45968  4.09866  3.13266  2.63370  1.61769  1.77448  2.68582  7.77962  4.50784     19 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     16   4.83799  7.34609  2.04950  3.69006  3.06264  3.18616  5.79917  4.13391  4.53459  5.65087  6.38711  1.24250  6.00529  3.32996  3.00743  1.76084  2.17579  5.73610  7.77945  3.01215     20 n - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     17   2.33804  7.34566  5.08495  3.16909  6.69043  1.40681  5.79679  6.17614  2.98977  3.26042  6.38642  3.74240  1.53904  2.83009  2.43987  3.80855  3.12695  2.80777  7.77852  6.36781     21 g - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.01443  7.75457  4.27590  0.61958  0.77255  0.48576  0.95510
     18   4.84885  7.36461  2.97171  1.84814  6.71065  1.74709  5.80643  6.19817  2.53480  5.67014  6.40557  1.68897  6.01152  2.37068  2.24211  2.28429  3.73201  5.75588  7.79602  6.38301     22 n - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00065  7.74078  8.46313  0.61958  0.77255  0.27376  1.42926
     19   6.44512  9.35223  0.71926  2.63399  8.55789  2.17230  3.52801  8.19966  2.94543  7.59825  8.55843  1.69580  7.12553  6.30718  7.20117  2.92614  6.77975  7.68588  9.74821  8.04211     23 d - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     20   1.75800  6.52404  7.15569  6.54977  4.09285  3.47586  6.71474  1.37972  6.33889  3.60889  5.65756  6.52819  6.71569  6.47259  6.34738  2.94922  3.18155  0.94659  7.20072  6.02273     24 v - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     21   9.03125  0.00165  9.14496  9.23767  9.76203  8.17789  9.74534 10.18815  9.42286  9.22920 10.58721  9.54527  8.81979  9.73212  9.15741  9.42691  9.45241  9.79205 10.03768 10.01024     25 C - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     22   0.60193  7.35904  8.16282  8.11730  7.88289  6.27243  8.42864  6.53688  7.92226  3.64885  7.78377  7.22175  7.13557  7.95274  7.82133  3.50972  3.40475  1.03683  9.40099  8.35331     26 A - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     23   0.77215  7.17783  5.80882  5.25264  6.64845  3.12506  6.36449  6.05445  2.59395  4.14795  6.50578  5.69396  6.41904  5.54340  2.86812  2.55964  1.55099  3.47628  7.93226  6.64422     27 a - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00064  7.75457  8.47691  0.61958  0.77255  0.48576  0.95510
     24   8.00193  3.79242  8.63289  8.70852  3.69385  8.26521  6.78266  7.54391  8.46780  6.57138  8.01610  7.75468  8.51332  7.97374  8.16552  7.71713  8.18510  7.51937  6.84314  0.05715     28 Y - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00043  7.75436        *  0.61958  0.77255  0.00000        *
//