view data/Motifs/Phylotype15.2.hmm @ 30:6669fd407dc9 draft default tip

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author johnheap
date Fri, 07 Jun 2019 11:07:05 -0400
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HMMER3/f [hmmer3.1-snap20121016 | October 2012]
NAME  Phylotype15.2
LENG  25
ALPH  amino
RF    no
MM    no
CONS  yes
CS    no
MAP   yes
DATE  Tue Jul 28 10:24:42 2015
NSEQ  19
EFFN  19.000000
CKSUM 4237242158
STATS LOCAL MSV       -6.8027  0.73800
STATS LOCAL VITERBI   -7.1293  0.73800
STATS LOCAL FORWARD   -3.4672  0.73800
HMM          A        C        D        E        F        G        H        I        K        L        M        N        P        Q        R        S        T        V        W        Y   
            m->m     m->i     m->d     i->m     i->i     d->m     d->d
  COMPO   3.13329  6.08575  3.15489  2.95214  3.91806  3.41639  4.00028  3.00580  2.72832  2.66038  4.08381  2.52800  2.44000  3.06229  2.86246  2.08793  1.85695  3.62279  5.42264  5.38976
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.00000        *
      1   3.99923  6.49087  4.19327  3.66655  5.85449  4.73782  2.35475  5.32914  2.17688  4.79174  5.53984  1.17476  5.13965  1.95392  4.03857  2.55520  1.97910  4.89442  6.90456  5.51468      1 n - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.09669  6.57018  2.39948  0.61958  0.77255  0.48576  0.95510
      2   2.17732  5.55451  4.85544  4.29102  2.42989  4.84740  5.16498  2.84592  2.72479  3.79715  4.69347  4.66108  1.79760  4.52820  4.56581  2.20100  1.32048  3.85134  6.17485  4.95005      2 t - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00229  6.47577  7.19812  0.61958  0.77255  0.19023  1.75314
      3   5.16716  7.98515  2.26909  1.57613  7.24136  5.21477  5.88317  6.85127  5.08231  6.26763  7.17846  1.90984  1.64391  5.06713  5.82500  4.97559  1.18971  6.34957  8.41353  6.76296      3 t - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
      4   2.39163  6.33953  2.00019  1.29312  5.68518  4.60233  4.78866  2.59277  2.26728  4.64442  5.38032  4.06980  4.99595  2.73061  2.31417  3.79192  4.06067  4.73054  3.18266  5.36123      4 e - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
      5   3.96627  6.32873  4.23096  2.64570  5.73743  4.71798  5.00780  5.19772  3.77634  4.72634  5.49406  4.26634  2.84180  2.36107  4.25768  1.10255  1.35235  2.86458  6.89554  5.51434      5 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
      6   2.34534  6.29050  4.10025  2.31516  5.61598  4.61305  4.80313  3.16601  3.54529  4.58781  5.33809  1.18954  3.39748  3.90679  2.16788  1.96894  4.06361  4.67096  3.32596  5.33929      6 n - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
      7   2.25935  6.20153  2.48308  3.59339  5.49382  2.63889  4.83126  3.15152  3.59281  4.48578  5.26039  2.71612  1.99136  3.94951  1.96629  3.83023  1.93985  2.54224  6.67212  5.29767      7 t - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
      8   4.59867  6.90946  4.96682  4.31114  6.43520  5.26387  5.26730  5.81238  1.50319  5.20166  6.01127  1.67749  5.63721  4.37799  1.78579  2.25830  1.42528  5.41833  7.22269  5.99382      8 t - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
      9   2.07116  5.38018  5.91887  5.31388  2.99775  2.52233  5.50640  3.82091  5.10947  1.95330  4.51314  5.30784  2.53727  5.24865  5.13335  4.45230  1.30798  1.83727  6.01717  4.84073      9 t - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.04969  6.57018  3.05603  0.61958  0.77255  0.48576  0.95510
     10   3.90160  5.49871  1.81332  4.43955  4.61473  4.93626  5.21326  2.35139  4.37065  1.63591  2.30171  4.77424  5.31194  2.13040  4.65907  2.94887  1.90835  3.75757  6.09680  4.88522     10 l - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.10804  6.52267  2.29326  0.61958  0.77255  0.97368  0.47432
     11   4.09417  5.71947  5.39261  4.97298  1.92389  5.01389  5.58481  4.37402  4.94623  1.78501  5.01199  2.25364  1.51498  5.16718  5.16060  1.40732  4.42075  4.14247  6.28941  4.94125     11 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.34852  6.41707  1.22884  0.61958  0.77255  1.55889  0.23619
     12   3.84021  6.13691  4.20518  3.59298  5.48801  2.30264  2.09725  4.89816  2.15841  1.42822  5.20019  4.08723  4.96512  3.79539  1.81235  2.36148  4.04757  4.53669  6.52690  5.23122     12 l - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00343  6.07198  6.79433  0.61958  0.77255  0.81407  0.58528
     13   3.88837  5.47592  5.05139  4.42628  4.60810  4.89791  5.11175  1.41923  2.75130  1.37646  4.58549  4.73017  2.15500  4.50942  2.42467  2.39990  4.11203  3.74355  6.05672  4.86029     13 l - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00271  6.30721  7.02956  0.61958  0.77255  0.28126  1.40580
     14   3.89141  5.82992  4.45641  2.21686  5.02082  4.77313  5.02910  2.80194  3.93025  1.78434  4.93662  2.44040  5.17475  4.25716  4.35031  1.24382  1.91557  4.13277  6.39668  5.11910     14 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00219  6.52267  7.24502  0.61958  0.77255  0.26947  1.44301
     15   5.44261  7.43310  6.04609  5.10774  7.19922  5.87929  5.58275  6.37325  1.36554  5.62898  6.54224  0.84897  6.19302  4.70639  1.58257  2.73932  5.50882  6.07229  7.52259  6.51538     15 n - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
     16   4.06732  5.65112  5.22924  4.61336  4.77076  5.08832  5.31163  1.81683  1.94927  1.47567  2.37012  4.92242  5.45447  2.09970  2.91293  4.36789  2.43008  3.91468  6.23273  5.03412     16 l - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
     17   4.52461  6.87862  4.88130  2.37033  6.34807  5.21014  2.78597  5.73574  1.40060  5.12781  5.92817  4.68144  5.56666  2.02024  1.64853  4.48365  1.59786  5.34355  7.15551  5.90809     17 k - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
     18   4.93061  7.24231  1.82125  4.34200  7.32881  5.18728  6.16390  6.93512  5.44033  6.41988  7.30453  2.69667  5.95678  5.37736  6.14195  0.46947  2.34247  6.23470  8.55796  7.00845     18 S - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
     19   4.89270  7.56780  2.83113  2.23466  6.91182  0.85334  5.70658  6.47493  4.76432  5.91661  6.75675  2.68607  5.76835  4.86794  5.40798  1.58110  2.42770  5.98709  8.05562  6.49386     19 g - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
     20   1.99296  6.22889  4.42353  3.88310  5.73354  4.73976  5.10184  5.18313  2.29792  4.73421  3.27444  3.10656  5.20566  4.22935  4.32596  1.21136  1.31224  4.76389  6.91706  5.56316     20 s - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.09579  6.57018  2.40854  0.61958  0.77255  0.48576  0.95510
     21   2.24252  5.52054  4.85389  2.32610  4.65992  4.85780  5.14346  4.01171  4.23270  2.74011  2.42137  4.65752  1.35987  4.52063  4.55634  1.67827  4.09559  2.59376  6.12311  4.90072     21 p - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00229  6.47667  7.19902  0.61958  0.77255  0.19128  1.74814
     22   4.22743  5.57754  2.47882  5.60294  2.44624  5.43982  5.79373  0.98818  5.40252  1.44083  4.63541  5.60233  5.78442  5.53192  5.41734  2.82237  4.46152  2.49298  6.26232  5.08943     22 i - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00208  6.57018  7.29252  0.61958  0.77255  0.48576  0.95510
     23   4.86499  6.94181  2.28245  4.84820  7.42693  5.27281  6.58379  7.04770  5.92885  6.60062  7.45877  5.28447  2.33388  5.84823  6.49214  4.94577  0.28432  6.21435  8.63706  7.31754     23 T - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.10276  6.57018  2.34077  0.61958  0.77255  0.48576  0.95510
     24   4.68355  6.92152  5.04828  4.38814  6.45927  5.30820  2.20284  5.81151  3.56253  5.19516  6.03014  4.81516  1.49509  1.36268  2.19566  4.65378  1.61961  5.44310  7.20217  6.01390     24 q - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00230  6.46972  7.19207  0.61958  0.77255  0.18346  1.78609
     25   2.62103  5.66872  5.54584  5.02204  2.82589  5.06768  5.63202  4.24907  4.90320  2.91415  4.90069  5.19302  0.56180  2.97464  5.10249  4.41188  2.39922  4.03114  6.39263  5.19110     25 P - - -
          2.68618  4.42225  2.77519  2.73123  3.46354  2.40513  3.72494  3.29354  2.67741  2.69355  4.24690  2.90347  2.73739  3.18146  2.89801  2.37887  2.77519  2.98518  4.58477  3.61503
          0.00140  6.56950        *  0.61958  0.77255  0.00000        *
//