# HG changeset patch
# User johnheap
# Date 1559728450 14400
# Node ID 7983a9305b5332555a249f4b1feaf1c1e02f5ff9
# Parent  c0a6a170163e04fe74962a0f10ada7dd94bbd051
Uploaded

diff -r c0a6a170163e -r 7983a9305b53 Tryp_V_T.py
--- a/Tryp_V_T.py	Tue Jun 04 18:11:54 2019 -0400
+++ b/Tryp_V_T.py	Wed Jun 05 05:54:10 2019 -0400
@@ -96,7 +96,8 @@
     dir_path = os.path.dirname(os.path.realpath(__file__))  # directory of this file
     refPath = dir_path + "/data/Reference/" + ref + "/" + refBase   # eg refPath = data/Reference/Trinity/Trinity.fasta
     # used for dirty # refPath = 'Trinity.fasta' # dirty one
-    track_df = pd.read_csv(dir_path+'/' + name + '.cuff/genes.fpkm_tracking', sep='\t')
+    cur_path = os.getcwd()
+    track_df = pd.read_csv(cur_path+'/' + name + '.cuff/genes.fpkm_tracking', sep='\t')
     names = track_df['locus']
     # print(len(names))
     # print(names[:5])