Mercurial > repos > jose_duarte > phagedpo
comparison DPOGALAXY.py @ 38:9558da071ec9 draft
Uploaded
| author | jose_duarte |
|---|---|
| date | Thu, 31 Aug 2023 14:30:31 +0000 |
| parents | a662eb3f87c2 |
| children | 1a450881f456 |
comparison
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| 37:10b8c91f55fd | 38:9558da071ec9 |
|---|---|
| 146 | 146 |
| 147 if __name__ == '__main__': | 147 if __name__ == '__main__': |
| 148 __location__ = os.path.realpath(os.path.join(os.getcwd(), os.path.dirname(__file__))) | 148 __location__ = os.path.realpath(os.path.join(os.getcwd(), os.path.dirname(__file__))) |
| 149 | 149 |
| 150 model = 'svm1495' | 150 model = 'svm1495' |
| 151 fasta_file = sys.argv[2] | 151 fasta_file = sys.argv[1] |
| 152 | |
| 153 #model = "C:/Users/biosy/Desktop/phageDPO/DPO/svm1495" | |
| 154 #fasta_file = "C:/Users/biosy/Downloads/bacillus.fasta" | |
| 155 | 152 |
| 156 PDPO = PDPOPrediction(__location__, model, fasta_file) | 153 PDPO = PDPOPrediction(__location__, model, fasta_file) |
| 157 PDPO.Datastructure() | 154 PDPO.Datastructure() |
| 158 PDPO.Prediction() | 155 PDPO.Prediction() |
