Mercurial > repos > jose_duarte > phagedpo

changeset 38:9558da071ec9 draft

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Uploaded
author jose_duarte
date Thu, 31 Aug 2023 14:30:31 +0000
parents 10b8c91f55fd
children 19a57d76f3b3
files DPOGALAXY.py
diffstat 1 files changed, 1 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/DPOGALAXY.py	Thu Aug 31 14:21:01 2023 +0000
+++ b/DPOGALAXY.py	Thu Aug 31 14:30:31 2023 +0000
@@ -148,10 +148,7 @@
     __location__ = os.path.realpath(os.path.join(os.getcwd(), os.path.dirname(__file__)))
 
     model = 'svm1495'
-    fasta_file = sys.argv[2]
-
-    #model = "C:/Users/biosy/Desktop/phageDPO/DPO/svm1495"
-    #fasta_file = "C:/Users/biosy/Downloads/bacillus.fasta"
+    fasta_file = sys.argv[1]
 
     PDPO = PDPOPrediction(__location__, model, fasta_file)
     PDPO.Datastructure()