comparison add_sample_name_as_first_line.xml @ 3:98f9da980bf5 draft default tip

planemo upload for repository https://github.com/jowong4/add_sample_name_as_first_line_of_file commit f3fe76f6cbf17b0ec4162065206483652a6519b7-dirty

2:74a9f37e2bc9

<tool id="my_addName" name="Add sample name as first line" version="0.1.1">
  <description>to an existing tabular file</description>
  <command interpreter="python">add_sample_name_as_first_line.py 
    --input "$input" 
    --sample "$input2.element_identifier" 
    --output "$output"

    </test>
  </tests>
  <help>
**What it does**

Adds a new line with the name of the sample file and removing [_12].fastq.gz from the name if there is match to the pattern.
Written by Johnathan Kwan Long Wong, [e-mail]
  </help>
  <citations>
    <citation type="bibtex">@UNPUBLISHED{Johnathan2018,
      author = "Johnathan W"}</citation>

3:98f9da980bf5

<tool id="my_addName" name="Add sample name as first line" version="0.1.2">
  <description>to an existing tabular file</description>
  <command interpreter="python">add_sample_name_as_first_line.py 
    --input "$input" 
    --sample "$input2.element_identifier" 
    --output "$output"

    </test>
  </tests>
  <help>
**What it does**

Adds a new line with the name of the sample file and removing [(_1|_2)]*.fastq(.gz)* from the name if there is match to the pattern.
Written by Johnathan Kwan Long Wong, [e-mail]
  </help>
  <citations>
    <citation type="bibtex">@UNPUBLISHED{Johnathan2018,
      author = "Johnathan W"}</citation>