comparison khmer_load_into_counting.xml @ 2:ab0f91be3a90 draft default tip

planemo upload

1:f491d18251e9

<tool id="khmer_load_into_counting" name="Load Into Counting" version="1.0.5">
    <description>Creates k-mer countgraph using reads</description>
    <requirements>
        <requirement type="package" version="2.1.2">khmer</requirement>
    </requirements>
    <command detect_errors="exit_code"><![CDATA[

            <param name="max_mem" type="integer" value="0" label="Maximum Memory" help="number of tables to use (default: False)" />
            <param name="fp_rate" type="integer" value="0" label="FP rate override" help="Override the automatic FP rate setting for the current script" />
        </section>
    </inputs>
    <outputs>
        <data name="hash_output" label="Hash output" format="data" from_work_dir="hash.ct.gz"/>
    </outputs>
    <help><![CDATA[
|| This is the script load-into-counting.py in khmer.
|| You are running khmer version 2.1.2
|| You are also using screed version 1.0

2:ab0f91be3a90

<tool id="khmer_load_into_counting" name="Load Into Counting" version="1.0.6">
    <description>Creates k-mer countgraph using reads</description>
    <requirements>
        <requirement type="package" version="2.1.2">khmer</requirement>
    </requirements>
    <command detect_errors="exit_code"><![CDATA[

            <param name="max_mem" type="integer" value="0" label="Maximum Memory" help="number of tables to use (default: False)" />
            <param name="fp_rate" type="integer" value="0" label="FP rate override" help="Override the automatic FP rate setting for the current script" />
        </section>
    </inputs>
    <outputs>
        <data name="hash_output" label="Hash output" format="data" type="data_collection" from_work_dir="hash.ct.gz"/>
    </outputs>
    <help><![CDATA[
|| This is the script load-into-counting.py in khmer.
|| You are running khmer version 2.1.2
|| You are also using screed version 1.0