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author jowong
date Mon, 29 Oct 2018 07:52:12 -0400
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<tool id="prince_postprocess" name="Prince Postprocess" version="1.0.0">
    <description>Postprocess PRINCE galaxy output</description>
    <command interpreter="python"><![CDATA[
        prince_postprocess.py -i $prince_output  -s #for $path in $paths# $path.element_identifier #end for#
    ]]></command>
    <inputs>
        <param name="paths" type="data" format="data" label="Collection of files" help="" optional="False" multiple="True"/>
        <param name="prince_output" format="txt" type="data" label="PRINCE output"  />
    </inputs>
    <outputs>
        <data name="output" format="txt" from_work_dir="prince_postprocess_output.txt"/>
    </outputs>
    <help>
This tool processes the PRINCE galaxy output such that it is in line with the command line
    </help>
    <citations>
    </citations>
</tool>