# HG changeset patch
# User jtilman
# Date 1358610380 -3600
# Node ID 69ddef2ec7d289e5ec191bf5f5695afce39b4a1f
# Parent  346a2b0979ea47ac783cca1767468ff8bb3aa7bc
Updated help section.

diff -r 346a2b0979ea -r 69ddef2ec7d2 flexbar.xml
--- a/flexbar.xml	Thu Jan 17 18:26:14 2013 +0100
+++ b/flexbar.xml	Sat Jan 19 16:46:20 2013 +0100
@@ -371,11 +371,11 @@
 	
 	<help>
 
-**Flexbar description**
+**Description**
 
-Flexbar_ is a program to preprocess sequencing data. It demultiplexes barcoded runs and removes adapter sequences. Further, basic read trimming and filtering options are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform.
+Flexbar is a program to preprocess sequencing data. It demultiplexes barcoded runs and removes adapter sequences. Further, basic read trimming and filtering options are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform. Flexbar is available on the project_ page.
 
-.. _Flexbar: https://sourceforge.net/projects/flexbar
+.. _project: https://sourceforge.net/projects/flexbar
 
 ------
 
@@ -393,19 +393,18 @@
 
 ------
 
+**Documentation**
+
+Further documentation is available on the `manual`__ wiki page and via the command line help screen.
+
+.. __: http://sourceforge.net/p/flexbar/wiki
+
+------
+
 **Reference**
 
 Matthias Dodt, Johannes T. Roehr, Rina Ahmed, Christoph Dieterich: Flexbar — flexible barcode and adapter processing for next-generation sequencing platforms. Biology 2012, 1(3):895-905.
 
-------
-
-**Documentation**
-
-.. class:: warningmark
-
-Further documentation is available on the `manual`__ wiki and via the command line help screen.
-
-.. __: http://sourceforge.net/p/flexbar/wiki
 	</help>
 
 </tool>