Mercurial > repos > jtilman > flexbar

changeset 39:ae7d2b47ad07 draft

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Uploaded
author jtilman
date Sun, 01 Jul 2018 07:59:40 -0400
parents 216a55a39b52
children 2fcee21876db
files flexbar.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/flexbar.xml	Sun Jul 01 06:46:26 2018 -0400
+++ b/flexbar.xml	Sun Jul 01 07:59:40 2018 -0400
@@ -222,14 +222,14 @@
 				<option value="pc">Paired read collection</option>
 			</param>
 			<when value="se">
-				<param name="rs" type="data" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz" label="Fastq read file"/>
+				<param name="rs" type="data" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz,fastqsanger.bz2,fastqsolexa.bz2,fastqillumina.bz2" label="Fastq read file"/>
 			</when>
 			<when value="pe">
-				<param name="r1" type="data" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz" label="Fastq read file 1"/>
-				<param name="r2" type="data" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz" label="Fastq read file 2"/>
+				<param name="r1" type="data" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz,fastqsanger.bz2,fastqsolexa.bz2,fastqillumina.bz2" label="Fastq read file 1"/>
+				<param name="r2" type="data" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz,fastqsanger.bz2,fastqsolexa.bz2,fastqillumina.bz2" label="Fastq read file 2"/>
 			</when>
 			<when value="pc">
-				<param name="rc" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz" type="data_collection" collection_type="paired" label="Fastq pair collection"/>
+				<param name="rc" format="fastqsanger,fastqsolexa,fastqillumina,fastqsanger.gz,fastqsolexa.gz,fastqillumina.gz,fastqsanger.bz2,fastqsolexa.bz2,fastqillumina.bz2" type="data_collection" collection_type="paired" label="Fastq pair collection"/>
 			</when>
 		</conditional>