comparison bulk_download.xml @ 3:4d03df88688d draft default tip

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3:4d03df88688d

<tool id="bulk_download" name="Bulk Download" version="1.0">
	<description>Bulk Downloader</description>
	<command interpreter="python">$script_file $output $output.id $__new_file_path__</command>
	<inputs>
		<param name="urls_txt" type="text" area="True" size="5x35" label="URL Text" optional="True"/>
		<param name="urls_file" type="data" label="URL File" optional="True"/>
		<param name="decompress" type="boolean" label="Decompress" value="true"/>
		
	</inputs>
	<outputs>
		<data name="output"/>
	</outputs>
	<configfiles>
        	<configfile name="script_file"><![CDATA[#!/usr/bin/env python
import os
import sys
import urllib
import tempfile

urls_txt  = """${urls_txt}"""
urls_file = """${urls_file}"""
decompress = "${decompress}"

output = sys.argv[1]
output_id = sys.argv[2]
output_dir = sys.argv[3]


if len(urls_file) and urls_file != "None":
    handle = open(urls_file)
else:
    handle = StringIO(urls_txt)

#fix for multiple outputs
opath = output
for line in handle:
    url = line.rstrip()
    base = os.path.basename(url)
    h, path = tempfile.mkstemp(dir="./")
    os.close(h)
    urllib.urlretrieve(url, path)
    if decompress == "true":
        if base.endswith(".gz"):
            import gzip
            ohandle = open(opath, "wb")
            f = gzip.GzipFile(path, "rb")
            for chunk in iter(lambda: f.read(8192), ''): 
                ohandle.write(chunk)
            ohandle.close()
            f.close()
        
        if os.path.exists(path):
            os.unlink(path)
    else:
        shutil.move(path, opath)

]]></configfile>
	</configfiles>
</tool>