Mercurial > repos > kevyin > fastq_groomer_parallel

comparison fastq_groomer_parallel.xml @ 3:66ca0d174cf2 draft

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author kevyin
date Sun, 27 Apr 2014 02:17:09 -0400
parents cac848910bd8
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2:cac848910bd8 3:66ca0d174cf2
9 #end if 9 #end if
10 'ascii' 'summarize_input' 10 'ascii' 'summarize_input'
11 #else: 11 #else:
12 '${options_type.output_type}' '${options_type.force_quality_encoding}' '${options_type.summarize_input}' 12 '${options_type.output_type}' '${options_type.force_quality_encoding}' '${options_type.summarize_input}'
13 #end if 13 #end if
14 '8' 14 "\${GALAXY_SLOTS:-4}"
15 </command> 15 </command>
16 <inputs> 16 <inputs>
17 <param name="input_file" type="data" format="fastq" label="File to groom" /> 17 <param name="input_file" type="data" format="fastq" label="File to groom" />
18 <param name="input_type" type="select" label="Input FASTQ quality scores type"> 18 <param name="input_type" type="select" label="Input FASTQ quality scores type">
19 <option value="solexa">Solexa</option> 19 <option value="solexa">Solexa</option>