Mercurial > repos > koen > gbsx
comparison gbsx_digest.xml @ 23:3b325560887b draft default tip
new version of gbsx: v1.2 with barcodeGenerator, demultiplex and digest
| author | koen |
|---|---|
| date | Tue, 26 Jan 2016 07:56:34 -0500 |
| parents | 062399f3787f |
| children |
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| 22:062399f3787f | 23:3b325560887b |
|---|---|
| 1 <tool id="gbsx_digest" name="GBSX: Digest" version="1.1.5"> | 1 <tool id="gbsx_digest" name="GBSX: Digest" version="1.1.5"> |
| 2 <description>simulates a digest for the selection of the best enzymes</description> | 2 <description>simulates a digest for the selection of the best enzymes</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="1.1.5">GBSX</requirement> | 4 <requirement type="package" version="1.2">GBSX</requirement> |
| 5 <requirement type="package" version="1.6.922">bioperl</requirement> | |
| 5 </requirements> | 6 </requirements> |
| 6 <command interpreter="sh"> | 7 <command interpreter="sh"> |
| 7 gbsx_digest.sh $genome $read_length $enzyme_combination $adv.min_size $adv.max_size $digest_bed $digest_result | 8 gbsx_digest.sh $genome $read_length $enzyme_combination $adv.min_size $adv.max_size $digest_bed $digest_result |
| 8 </command> | 9 </command> |
| 9 <inputs> | 10 <inputs> |