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1 <tool id="EMBOSS: kgenemarkhmm" name="kgenemarkhmm" version="1.0.2">
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2 <description>Finds genes in prokaryotic genomes using GeneMarkhmm</description>
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3 <command>kgenemarkhmm -seqall $input1 -title $title -list $list -rbs $rbs -auto -outfile $out_file1</command>
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4 <inputs>
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5 <param format="data" name="input1" type="data">
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6 <label>Sequence</label>
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7 </param>
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8 <param name="title" size="4" type="text" value="">
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9 <label>Your job title</label>
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10 </param>
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11 <param name="list" type="select" value="no">
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12 <label>Show list about species of prediction models</label>
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13 <option value="no">No</option>
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14 <option value="yes">Yes</option>
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15 </param>
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16 <param name="rbs" type="select" value="yes">
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17 <label>Use RBS model if available</label>
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18 <option value="no">No</option>
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19 <option value="yes">Yes</option>
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20 </param>
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21
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22 </inputs>
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23 <outputs>
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24 <data format="txt" name="out_file1" label="${tool.name} for ${input1.name}" />
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25 </outputs>
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26 </tool>
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