Mercurial > repos > ktnyt > gembassy

diff glang-galaxy-conf/gembassy/gphx.xml @ 2:8947fca5f715 draft default tip

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author ktnyt
date Fri, 26 Jun 2015 05:21:44 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/glang-galaxy-conf/gembassy/gphx.xml	Fri Jun 26 05:21:44 2015 -0400
@@ -0,0 +1,17 @@
+<tool id="EMBOSS: gphx" name="gphx" version="1.0.2">
+  <description>Identifies predicted highly expressed gene</description>
+  <command>gphx -sequence $input1 -translate $translate -auto -noaccid -outfile $out_file1</command>
+  <inputs>
+  <param format="data" name="input1" type="data">
+    <label>Sequence</label>
+  </param>
+    <param name="translate" type="select" value="no">
+      <label>Include when translating using standard codon table</label>
+      <option value="no">No</option>
+      <option value="yes">Yes</option>
+    </param>
+  </inputs>
+  <outputs>
+    <data format="csv" name="out_file1" label="${tool.name} for ${input1.name}" />    
+  </outputs>
+</tool>