diff GEMBASSY-1.0.3/acd/gsignature.acd @ 2:8947fca5f715 draft default tip

Uploaded

--- a/GEMBASSY-1.0.3/acd/gsignature.acd	Fri Jun 26 05:20:29 2015 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,64 +0,0 @@
-application: gsignature [
-  documentation: "Calculates oligonucleotide usage (genomic signature)"
-  groups: "Nucleic:Composition"
-  embassy: "gembassy"
-  relations: "EDAM_topic:0157 Sequence composition analysis"
-  relations: "EDAM_operation:0377 Sequence composition calculation
-              (nucleic acid)"
-]
-
-section: input [
-  information: "Input section"
-  type: "page"
-]
-
-  seqall: sequence [
-    parameter: "Y"
-    type: "nucleotide"
-    features: "Y"
-    relations: "EDAM_data:0849 Sequence record"
-  ]
-
-endsection: input
-
-section: advanced [
-  information: "Advanced section"
-  type: "page"
-]
-
-  integer: wordlength [
-    information: "Word length"
-    default: "2"
-  ]
-
-  boolean: bothstrand [
-    information: "Include to use both strands direct used otherwise"
-    default: "Y"
-  ]
-
-  boolean: oe [
-    information: "Use observed (0) or O/E (1) value"
-    information: "Include to use O/E value observed values used otherwise"
-    default: "Y"
-  ]
-
-  boolean: accid [
-    information: "Include to use sequence accession ID as query"
-    default: "N"
-  ]
-
-endsection: advanced
-
-section: output [
-  information: "Output section"
-  type: "page"
-]
-
-  outfile: outfile [
-    parameter: "Y"
-    information: "Program compseq output file"
-    knowntype: "compseq output"
-    relations: "EDAM_data:3086 Nucleic acid sequence composition"
-  ]
-
-endsection: output