Mercurial > repos > ktnyt > gembassy
view glang-galaxy-conf/gembassy/ggenomicskew.xml @ 2:8947fca5f715 draft default tip
Uploaded
author | ktnyt |
---|---|
date | Fri, 26 Jun 2015 05:21:44 -0400 |
parents | |
children |
line wrap: on
line source
<tool id="EMBOSS: ggenomicskew" name="ggenomicskew" version="1.0.2"> <description>Calculates and plots the GC skew in different regions of the given genome</description> <command interpreter="perl">gembassy_calcandplot_wrapper.pl ggenomicskew -sequence $input1 -divide $divide -at $at -auto $out_file1 $out_file2</command> <inputs> <param format="data" name="input1" type="data"> <label>Sequence</label> </param> <param name="divide" size="4" type="integer" value="250"> <label>Window to divide into</label> </param> <param name="at" type="select" value="no"> <label>Include when observing AT skew instead of GC skew</label> <option value="no">No</option> <option value="yes">Yes</option> </param> </inputs> <outputs> <data format="csv" name="out_file1" label="${tool.name} data for ${input1.name}" /> <data format="png" name="out_file2" label="${tool.name} plot for ${input1.name}" /> </outputs> </tool>