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changeset 33:108ad21bc702 draft

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Uploaded
author kyu
date Wed, 11 Jul 2018 13:37:38 -0400
parents c3a6a4f259cc
children 5024f7cb97da
files vampire_analysis.xml
diffstat 1 files changed, 44 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/vampire_analysis.xml	Wed Jul 11 13:37:38 2018 -0400
@@ -0,0 +1,44 @@
+<tool id="vampire_analysis" name="vampire_analysis" version="1.1.0">
+    <requirements>
+        <requirement type="package" version="2.7.14">python</requirement>
+        <requirement type="package" version="0.0.14">vampireingalaxy</requirement>
+        <requirement type="package" version="0.22.0">pandas</requirement>
+        <requirement type="package" version="1.0.0">scipy</requirement>
+        <requirement type="package" version="1.14.5">numpy</requirement>
+        <requirement type="package" version="5.1.0">pillow</requirement>
+        <requirement type="package" version="2.1.1">matplotlib</requirement>
+        <requirement type="package" version="0.19.1">scikit-learn</requirement>
+        <requirement type="package" version="3.4.1">opencv</requirement>
+        <requirement type="package" version="10.5.4">mesa</requirement>
+
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+        analysis-run.py -i "${Path_to_the_cell_profiler_default_output_folder}" -o "$output1" -m "$modeling" -n "$cluster_number"
+    ]]></command>
+    <inputs>
+        <param type="text" name="Path_to_the_cell_profiler_default_output_folder"/>
+        <param type="boolean" name="modeling" value="True" truevalue="build" falsevalue="apply"/>
+        <param type="integer" name="cluster_number" min="1" value="15"/>
+    </inputs>
+    <outputs>
+        <data name="output1" format="csv" />
+    </outputs>
+    <tests>
+        <test>
+            <param name="directory" value="direc.txt"/>
+            <output name="output1" file="hi.csv"/>
+        </test>
+    </tests>
+    <help><![CDATA[
+        No Help is available at this moment.
+    ]]></help>
+    <citations>
+        <citation type="bibtex">
+@misc{renameTODO,
+  author = {Han, Kyu Sang},
+  year = {2018},
+  title = {Mr.},
+  url = {https://kyusanghan.com},
+}</citation>
+    </citations>
+</tool>