Mercurial > repos > kyu > vampire
changeset 13:980e233d5e8c draft
Uploaded
| author | kyu |
|---|---|
| date | Wed, 13 Jun 2018 16:27:55 -0400 |
| parents | e2defce5b097 |
| children | 2846a7c9c766 |
| files | vampire_modeling_and_analysis.xml |
| diffstat | 1 files changed, 42 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/vampire_modeling_and_analysis.xml Wed Jun 13 16:27:55 2018 -0400 @@ -0,0 +1,42 @@ +<tool id="vampire_modeling_and_analysis" name="vampire_modeling_and_analysis" version="0.1.0"> + <requirements> + <requirement type="package" version="2.7.14">python</requirement> + <requirement type="package" version="0.0.11">vampireingalaxy</requirement> + <requirement type="package" version="0.22.0">pandas</requirement> + <requirement type="package" version="1.0.0">scipy</requirement> + <requirement type="package" version="1.14.2">numpy</requirement> + <requirement type="package" version="5.1.0">pillow</requirement> + <requirement type="package" version="2.1.1">matplotlib</requirement> + <requirement type="package" version="0.19.1">scikit-learn</requirement> + <requirement type="package" version="3.4.1">opencv</requirement> + </requirements> + <command detect_errors="exit_code"><![CDATA[ + analysis-run.py -i "${Path to the Cell Profiler Default Output Folder}" -o "$output1" -m "$modeling" -n "$cluster_number" + ]]></command> + <inputs> + <param type="text" name="Path to the Cell Profiler Default Output Folder"/> + <param type="boolean" name="modeling" value="True" truevalue="build" falsevalue="apply"/> + <param type="integer" name="cluster_number" min="1" value="15"/> + </inputs> + <outputs> + <data name="output1" format="csv" /> + </outputs> + <tests> + <test> + <param name="directory" value="direc.txt"/> + <output name="output1" file="hi.csv"/> + </test> + </tests> + <help><![CDATA[ + No Help is available at this moment. + ]]></help> + <citations> + <citation type="bibtex"> +@misc{renameTODO, + author = {Han, Kyu Sang}, + year = {2018}, + title = {Mr.}, + url = {https://kyusanghan.com}, +}</citation> + </citations> +</tool>