diff history_metadata_extractor.xml @ 0:426b0f85a311 draft

" master branch Updating"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/history_metadata_extractor.xml	Tue Jul 19 07:36:57 2022 +0000
@@ -0,0 +1,96 @@
+<tool
+  id="history_metadata_extractor"
+  name="History Metadata Extractor"
+  version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"
+  profile="21.09"
+>
+  <description>
+    displays information from exported history's jobs_attrs.txt file.
+  </description>
+  <macros>
+    <token name="@TOOL_VERSION@">1.0.0</token>
+    <token name="@VERSION_SUFFIX@">0</token>
+  </macros>
+  <requirements>
+    <requirement type="package" version="3.10.5">python</requirement>
+  </requirements>
+  <stdio>
+    <exit_code range="1" level="fatal" description="Missing parameter error" />
+    <exit_code range="2" level="fatal" description="Bad parameter's value" />
+    <exit_code range="3" level="fatal" description="Missing input file" />
+    <exit_code range="4:254" level="fatal" description="Unknown error" />
+    <exit_code range="255" level="fatal" description="No any result to output" />
+  </stdio>
+  <version_command>
+    python3 '$__tool_directory__/history_metadata_extractor.py' --version | head -n 1
+  </version_command>
+  <command>
+    <![CDATA[
+python3 '$__tool_directory__/history_metadata_extractor.py'
+  --jobs-attrs '$jobs_attrs'
+  --dataset-attrs '$dataset_attrs'
+  --output '$history_visu'
+    ]]>
+  </command>
+  <inputs>
+    <param
+      argument="--jobs-attrs"
+      type="data"
+      format="txt"
+      label="Exported history's jobs_attrs.txt file"
+      help="Export and extract an history. Select the file 'jobs_attrs.txt'"
+    />
+    <param
+      argument="--dataset-attrs"
+      type="data"
+      format="txt"
+      label="Exported history's dataset_attrs.txt file"
+      help="Export and extract an history. Select the file 'dataset_attrs.txt'"
+    />
+  </inputs>
+  <outputs>
+    <data
+      name="history_visu"
+      format="html"
+      label="history_visu.html"
+    />
+  </outputs>
+  <tests>
+    <test>
+      <param name="jobs_attrs" value="jobs_attrs.txt" />
+      <param name="dataset_attrs" value="datasets_attrs.txt" />
+      <output name="history_visu" file="out.html" />
+    </test>
+  </tests>
+  <help><![CDATA[
+.. class:: infomark
+
+**Authors** Lain Pavot
+
+.. class:: infomark
+
+---------------------------------------------------
+
+
+
+
+History Metadata Extractor
+
+Extracts informations from the `jobs_attrs.txt` file in exported histories,
+and produces an html page showing these informations in a kawaii table.
+
+
+
+Metadata
+
+ * **@AUTHOR**: Lain Pavot - [e-mail]
+ * **@CREATION DATE**: 22/06/2022
+ * **@DATE**: 22/06/2022
+ * **@VERSION**: 0.1.0
+
+
+
+
+]]>
+  </help>
+</tool>