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comparison compound-ref.html @ 0:b58b229c4cbf draft

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planemo upload commit 523a9c8df173302ad38e9f15e7d82eab01736551-dirty
author lain
date Fri, 03 Mar 2023 14:10:24 +0000
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1 <div class="tab-pane fade {{ ACTIVE_TAB_PLACEHOLDER }} in" id="tab-index-{{ TAB_INDEX_PLACEHOLDER }}">
2 <div class="panel-group" id="accordion-{{ TAB_INDEX_PLACEHOLDER }}">
3 <div class="panel panel-default">
4 <div class="panel-heading panel-success">
5 <h4 class="panel-title">
6 <a data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step0-{{ TAB_INDEX_PLACEHOLDER }}">
7 Spectrum Type <i id="step0sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
8 </a>
9 </h4>
10 </div>
11 <div id="step0-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse in">
12 <div class="panel-body">
13 <button class="btn btn-disabled" disabled="disabled"><i class="fa fa-plus-circle"></i> GC-MS spectrum</button>
14 <button id="set_LC_MS_spectrum_button" class="btn btn-primary" onclick="ctx().addOneSpectrum(2);"><i class="fa fa-plus-circle"></i> LC-MS spectrum</button>
15 <button id="set_LC_MSMS_spectrum_button" class="btn btn-primary" onclick="ctx().addOneSpectrum(5);"><i class="fa fa-plus-circle"></i> LC-MSMS spectrum</button>
16 </div>
17 </div>
18 </div>
19 <div id="add1spectrum-sampleData-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
20 <div class="panel-heading panel-success">
21 <h4 class="panel-title">
22 <a id="linkActivateStep1-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step1-{{ TAB_INDEX_PLACEHOLDER }}">
23 Sample Type <i id="step1sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
24 </a>
25 </h4>
26 </div>
27 <div id="step1-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
28 <div class="panel-body">
29 <div class="col-lg-12">
30 <div class="col-lg-8">
31 <div class="panel panel-default">
32 <div class="panel-heading">
33 <div class="form-group input-group has-error">
34 <span class="input-group-addon">Sample Type</span>
35 <select id="add1spectrum-sample-type-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-sampleForm is-mandatory">
36 <option value="" selected="selected" disabled="disabled">choose in list…</option>
37 <option value="compound-ref">Ref. Chemical Compound</option>
38 </select>
39 </div>
40 </div>
41 <div class="panel-body">
42 <div id="add1spectrum-sample-type-compound-ref-{{ TAB_INDEX_PLACEHOLDER }}" class="add1spectrum-sample-type-panel" style="display:none;">
43 <div class="form-group input-group has-error">
44 <span class="input-group-addon">InChIKey</span>
45 <input id="add1spectrum-sample-inchikey-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-mandatory" placeholder="e.g. RYYVLZVUVIJVGH-UHFFFAOYSA-N">
46 <span class="input-group-btn">
47 <button class="btn btn-default" type="button" onclick="ctx().pickChemicalCompound();">
48 <i class="fa fa-search"></i>
49 </button>
50 </span>
51 </div>
52 <div class="form-group input-group has-warning">
53 <span class="input-group-addon">concentration <small>(mmol/L)</small></span>
54 <input id="add1spectrum-sample-concentration-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="42">
55 </div>
56 <div class="form-group input-group opt-ms has-warning" style="display: none;">
57 <span class="input-group-addon">solvent</span>
58 <select id="add1spectrum-sample-lcmsSolvent-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-sampleForm is-optional"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="none" class="">none</option><option value="H2O" class="">H2O</option><option value="3/5 in H2O + 0.1% AF/ ACN + 0.1% AF (50/50, V/V)" class="">3/5 in H2O + 0.1% AF/ ACN + 0.1% AF (50/50, V/V)</option><option value="ACN/H2O (1/1, V/V)" class="">ACN/H2O (1/1, v/v)</option><option value="CH3OH/H2O (1/1, V/V)" class="">CH3OH/H2O (1/1, v/v)</option><option value="H2O/ACN (40/60)" class="">H2O/ACN (40/60)</option><option value="H2O/ACN (95/5)" class="">H2O/ACN (95/5)</option><option value="H20+0.1% FORMIC ACID / ACN+0.1% FORMIC ACID (50/50, V/V)" class="">H20+0.1% Formic Acid / ACN+0.1% Formic Acid (50/50, V/V)</option></select>
59 </div>
60 <div class="form-group input-group has-warning">
61 <span class="input-group-addon">InChI</span>
62 <input id="add1spectrum-sample-inchi-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="e.g. InChI=1S/C8H10N4O2/c1-10-4-9-6-5(10)7(13)12(3)8(14)11(6)2/h4H,1-3H3">
63 </div>
64 <div class="form-group input-group has-warning">
65 <span class="input-group-addon">Molecule common name</span>
66 <input id="add1spectrum-sample-commonName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="e.g. Caffeine">
67 </div>
68 </div>
69 <div id="add1spectrum-sample-type-rcc-added-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default add1spectrum-sample-type-panel" style="display:none;">
70 <div class="panel-heading">
71 <h3 class="panel-title">Reference compound added</h3>
72 </div>
73 <div class="panel-body" style="padding: 0px;">
74 <div id="container_RCC_ADDED-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable"></div>
75 </div>
76 </div>
77 </div>
78 </div>
79 </div>
80 <div class="col-lg-4">
81 <div id="sample-bonus-display-{{ TAB_INDEX_PLACEHOLDER }}"></div>
82 &nbsp;
83 </div>
84 </div>
85 <div class="col-lg-12">
86 <div class="col-lg-8">
87 <br>
88 <button id="btnSwitch-gotoStep2-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(2);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
89 </div>
90 <div class="col-lg-4">&nbsp;</div>
91 </div>
92 </div>
93 </div>
94 </div>
95 <div id="add1spectrum-chromatographyData-LC-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
96 <div class="panel-heading panel-success">
97 <h4 class="panel-title">
98 <a id="linkActivateStep2-lc-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step2-lc-{{ TAB_INDEX_PLACEHOLDER }}">
99 Liquid Chromatography <i id="step2-lc-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
100 </a>
101 </h4>
102 </div>
103 <div id="step2-lc-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
104 <div class="panel-body">
105 <div class="col-lg-12">
106 <div class="col-lg-6">
107 <div class="panel panel-default">
108 <div class="panel-heading">
109 <h3 class="panel-title">Chromatography Param.</h3>
110 </div>
111 <div class="panel-body">
112 <div class="form-group input-group has-error">
113 <span class="input-group-addon">Method</span>
114 <select
115 id="add1spectrum-chromatoLC-method-{{ TAB_INDEX_PLACEHOLDER }}"
116 class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"
117 ></select>
118 </div>
119 <div id="alertBoxSelectTemplate-{{ TAB_INDEX_PLACEHOLDER }}"></div>
120 <div class="form-group input-group has-error">
121 <span class="input-group-addon">Column constructor</span>
122 <select id="add1spectrum-chromatoLC-colConstructor-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="Agilent">Agilent</option><option value="alltech">Alltech</option><option value="CIL cluzeau">Cil cluzeau</option><option value="Daicel">Daicel</option><option value="Hypersil">Hypersil</option><option value="Interchim">Interchim</option><option value="Macherey nagel">Macherey nagel</option><option value="Merck">Merck</option><option value="Phenomenex">Phenomenex</option><option value="Shiseido">Shiseido</option><option value="Supelco (sigma-aldrich)">Supelco (sigma-aldrich)</option><option value="Thermo">Thermo</option><option value="Vydac">Vydac</option><option value="Waters">Waters</option><option value="YMC">YMC</option><option value="other">Other</option></select>
123 </div>
124 <div class="form-group input-group ">
125 <span class="input-group-addon">Column constructor (other)</span>
126 <input id="add1spectrum-chromatoLC-colConstructorOther-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm" disabled="disabled" placeholder="e.g. HAL 9000">
127 </div>
128 <div class="form-group input-group has-warning">
129 <span class="input-group-addon">Column name</span>
130 <input id="add1spectrum-chromatoLC-colName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. UPLC HSS T3">
131 </div>
132 <div class="form-group input-group has-error">
133 <span class="input-group-addon">Column length (mm)</span>
134 <input id="add1spectrum-chromatoLC-colLength-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 150">
135 </div>
136 <div class="form-group input-group has-error">
137 <span class="input-group-addon">Column diameter (mm)</span>
138 <input id="add1spectrum-chromatoLC-colDiameter-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 2.1">
139 </div>
140 <div class="form-group input-group has-error">
141 <span class="input-group-addon">Particule size (µm)</span>
142 <input id="add1spectrum-chromatoLC-colParticuleSize-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 1.8">
143 </div>
144 <div class="form-group input-group has-warning">
145 <span class="input-group-addon">Column temperature (°C)</span>
146 <input id="add1spectrum-chromatoLC-colTemperature-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 30">
147 </div>
148 <div class="form-group input-group has-error">
149 <span class="input-group-addon">LC mode</span>
150 <select id="add1spectrum-chromatoLC-LCMode-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory">
151 <option value="" selected="selected" disabled="disabled">choose in list…</option>
152 <option value="Gradient">Gradient</option>
153 <option value="Isocratic">Isocratic</option>
154 </select>
155 </div>
156 <div class="form-group input-group has-warning">
157 <span class="input-group-addon">Separation flow rate (µL/min)</span>
158 <input id="add1spectrum-chromatoLC-separationFlowRate-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 400">
159 </div>
160 <div class="form-group input-group has-error">
161 <span class="input-group-addon">Separation solvent A</span>
162 <select id="add1spectrum-chromatoLC-separationSolvA-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="5% ACN + 0.1% FA in H2O">5% ACN + 0.1% FA in H2O</option><option value="10% ACN + 0.1% FA in H2O">10% ACN + 0.1% FA in H2O</option><option value="10mM (NH4)2CO3 / ACN (20/80) (v/v)">10mM (NH4)2CO3 / ACN (20/80) (v/v)</option><option value="Acetonitrile">Acetonitrile</option><option value="Acetonitrile + 0.1% Formic Acid">Acetonitrile + 0.1% Formic Acid</option><option value="H2O + 0.1% Formic Acid">H2O + 0.1% Formic Acid</option><option value="H2O, ammonium carbonate 10 mM, pH10.5">H2O, ammonium carbonate 10 mM, pH10.5</option><option value="H2O, ammonium acetate 2.5 mM">H2O, ammonium acetate 2.5 mM</option><option value="H2O / CH3OH / CH3CO2H (95/5/0.1)">H2O / CH3OH / CH3CO2H (95/5/0.1)</option><option value="Methanol">Methanol</option><option value="Methanol / H2O (1/1)">Methanol / H2O (1/1)</option><option value="Methanol / H2O (1/1), 0.1% FA">Methanol / H2O (1/1), 0.1% FA</option><option value="Methanol / CH3CO2H (100/0.1)">Methanol / CH3CO2H (100/0.1)</option><option value="Methanol / ACN (60/40) ammonium acetate 2.5 mM">Methanol / ACN (60/40) ammonium acetate 2.5 mM</option></select>
163 </div>
164 <div class="form-group input-group has-warning">
165 <span class="input-group-addon">pH solvent A (if acqueous solvant)</span>
166 <input id="add1spectrum-chromatoLC-separationSolvApH-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 7.0">
167 </div>
168 <div class="form-group input-group has-error">
169 <span class="input-group-addon">Separation solvent B</span>
170 <select id="add1spectrum-chromatoLC-separationSolvB-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="5% ACN + 0.1% FA in H2O">5% ACN + 0.1% FA in H2O</option><option value="10% ACN + 0.1% FA in H2O">10% ACN + 0.1% FA in H2O</option><option value="10mM (NH4)2CO3 / ACN (20/80) (v/v)">10mM (NH4)2CO3 / ACN (20/80) (v/v)</option><option value="Acetonitrile">Acetonitrile</option><option value="Acetonitrile + 0.1% Formic Acid">Acetonitrile + 0.1% Formic Acid</option><option value="H2O + 0.1% Formic Acid">H2O + 0.1% Formic Acid</option><option value="H2O, ammonium carbonate 10 mM, pH10.5">H2O, ammonium carbonate 10 mM, pH10.5</option><option value="H2O, ammonium acetate 2.5 mM">H2O, ammonium acetate 2.5 mM</option><option value="H2O / CH3OH / CH3CO2H (95/5/0.1)">H2O / CH3OH / CH3CO2H (95/5/0.1)</option><option value="Methanol">Methanol</option><option value="Methanol / H2O (1/1)">Methanol / H2O (1/1)</option><option value="Methanol / H2O (1/1), 0.1% FA">Methanol / H2O (1/1), 0.1% FA</option><option value="Methanol / CH3CO2H (100/0.1)">Methanol / CH3CO2H (100/0.1)</option><option value="Methanol / ACN (60/40) ammonium acetate 2.5 mM">Methanol / ACN (60/40) ammonium acetate 2.5 mM</option></select>
171 </div>
172 <div class="form-group input-group has-warning">
173 <span class="input-group-addon">pH solvent B (if acqueous solvant)</span>
174 <input id="add1spectrum-chromatoLC-separationSolvBApH-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 7.0">
175 </div>
176 </div>
177 </div>
178 </div>
179 <div class="col-lg-6">
180 <div class="panel panel-default">
181 <div class="panel-heading">
182 <h3 class="panel-title">Separation flow gradient</h3>
183 </div>
184 <div class="panel-body" style="padding: 0px;">
185 <div id="container_LC_SFG-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable"></div>
186 </div>
187 </div>
188 </div>
189 </div>
190 <div class="col-lg-12">
191 <div class="col-lg-8">
192 <br>
193 <button id="btnSwitch-gotoStep3-lc-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
194 </div>
195 <div class="col-lg-4">&nbsp;</div>
196 </div>
197 </div>
198 </div>
199 </div>
200 <div id="add1spectrum-chromatographyData-GC-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
201 <div class="panel-heading panel-success">
202 <h4 class="panel-title">
203 <a id="linkActivateStep2-gc-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step2-gc-{{ TAB_INDEX_PLACEHOLDER }}">
204 Gaz Chromatography <i id="step2-gc-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
205 </a>
206 </h4>
207 </div>
208 <div id="step2-gc-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
209 <div class="panel-body">
210 <div class="col-lg-12">
211 <div class="col-lg-6">
212 i &lt;3 GC
213 </div>
214 <div class="col-lg-6">&nbsp;</div>
215 </div>
216 <div class="col-lg-12">
217 <div class="col-lg-8">
218 <br>
219 <button id="btnSwitch-gotoStep3-gc-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
220 </div>
221 <div class="col-lg-4">&nbsp;</div>
222 </div>
223 </div>
224 </div>
225 </div>
226 <div id="add1spectrum-analyserData-MS-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
227 <div class="panel-heading panel-success">
228 <h4 class="panel-title">
229 <a id="linkActivateStep3-ms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step3-ms-{{ TAB_INDEX_PLACEHOLDER }}">
230 MS Analyzer <i id="step3-ms-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
231 </a>
232 </h4>
233 </div>
234 <div id="step3-ms-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
235 <div class="panel-body">
236 <div class="col-lg-12">
237 <div class="col-lg-6">
238 <br>
239 <div class="panel panel-default">
240 <div class="panel-heading">
241 <h3 class="panel-title">Analyzer</h3>
242 </div>
243 <div class="panel-body">
244 <div class="form-group input-group has-error">
245 <span class="input-group-addon">Instrument</span>
246 <input id="add1spectrum-analyzer-ms-instrument-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory" placeholder="e.g. Q-TOF; LTQ - Orbitrap">
247 </div>
248 <div class="form-group input-group has-warning">
249 <span class="input-group-addon">Model</span>
250 <input id="add1spectrum-analyzer-ms-model-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. QToF micro (Micromass Waters); XL; Impact II; ...">
251 </div>
252 <div class="form-group">
253 <div class="form-group input-group has-error">
254 <span class="input-group-addon">Ion analyzer Type</span>
255 <input id="add1spectrum-analyzer-ms-ionAnalyzerType-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory" placeholder="e.g. QTOF; QQQ; ...">
256 </div>
257 <p class="help-block">
258 <small>
259 Ion analyzer types are "B", "E", "FT" (include other types using FT like FTICR or Orbitrap), "IT", "Q", "TOF" (e.g.: "QTOF", "QQQ", "EB", "ITFT");
260 for further informations please refer to <a target="_BLANK" href="https://github.com/MassBank/MassBank-web/blob/main/Documentation/MassBankRecordFormat.md#212-record_title">MassBank Record documentation</a>.
261 </small>
262 </p>
263 </div>
264 </div>
265 </div>
266 </div>
267 <div class="col-lg-6">
268 <br>
269 <div class="panel panel-default">
270 <div class="panel-heading">
271 <h3 class="panel-title">Molecule Ionization</h3>
272 </div>
273 <div class="panel-body">
274 <div class="form-group input-group has-error">
275 <span class="input-group-addon">Ionization method <small>(POS/NEG)</small></span>
276 <select id="add1spectrum-analyzserMS-ionizationMethod-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory one-or-more">
277 <option value="" selected="selected" disabled="disabled">choose in list… (POS)</option>
278 <option value="ACPI">ACPI</option><option value="APPI">APPI</option><option value="EI">EI</option><option value="ESI">ESI</option><option value="FAB">FAB</option><option value="MALDI">MALDI</option></select>
279 <select id="add1spectrum-analyzserMS-ionizationMethod-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory one-or-more">
280 <option value="" selected="selected" disabled="disabled">choose in list… (NEG)</option>
281 <option value="ACPI">ACPI</option><option value="APPI">APPI</option><option value="EI">EI</option><option value="ESI">ESI</option><option value="FAB">FAB</option><option value="MALDI">MALDI</option></select>
282 </div>
283 <div class="form-group input-group has-warning">
284 <span class="input-group-addon">Spray (needle) gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span>
285 <input id="add1spectrum-analyzserMS-sprayGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (POS)">
286 <input id="add1spectrum-analyzserMS-sprayGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 20 (NEG)">
287 </div>
288 <div class="form-group input-group has-warning">
289 <span class="input-group-addon">Vaporizer gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span>
290 <input id="add1spectrum-analyzserMS-vaporizerGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 10 (POS)">
291 <input id="add1spectrum-analyzserMS-vaporizerGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 5 (NEG)">
292 </div>
293 <div class="form-group input-group has-warning">
294 <span class="input-group-addon">Vaporizer temperature <br><small>(°C, POS/NEG)</small></span>
295 <input id="add1spectrum-analyzserMS-vaporizerTemperature-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 330 (POS)">
296 <input id="add1spectrum-analyzserMS-vaporizerTemperature-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 330 (NEG)">
297 </div>
298 <div class="form-group input-group has-warning">
299 <span class="input-group-addon">Source gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span>
300 <input id="add1spectrum-analyzserMS-sourceGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (POS)">
301 <input id="add1spectrum-analyzserMS-sourceGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (NEG)">
302 </div>
303 <div class="form-group input-group has-warning">
304 <span class="input-group-addon">Ion transfer tube temperature <br> Transfer capillary temperature <small>(°C, POS/NEG)</small></span>
305 <input id="add1spectrum-analyzserMS-ionTransferTubeTemperatureOrTransferCapillaryTemperature-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 350 (POS)">
306 <input id="add1spectrum-analyzserMS-ionTransferTubeTemperatureOrTransferCapillaryTemperature-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 350 (NEG)">
307 </div>
308 <div class="form-group input-group has-warning">
309 <span class="input-group-addon">High voltage (ESI) <br> Corona voltage (APCI) <small>(in kV, POS/NEG)</small></span>
310 <input id="add1spectrum-analyzserMS-highVoltageOrCoronaVoltage-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 3.5 (POS)">
311 <input id="add1spectrum-analyzserMS-highVoltageOrCoronaVoltage-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 2.8 (NEG)">
312 </div>
313 </div>
314 </div>
315 </div>
316 <div class="col-lg-6 opt-msms">
317 <br>
318 <div class="panel panel-default">
319 <div class="panel-heading">
320 <h3 class="panel-title">Ion Storage / Ion Beam</h3>
321 </div>
322 <div class="panel-body">
323 <div class="form-group input-group has-warning">
324 <span class="input-group-addon">Type <small>(storage / beam)</small></span>
325 <select id="add1spectrum-ionTrapBeam-type-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional one-or-more">
326 <option value="" selected="selected" disabled="disabled">choose in list…</option>
327 <option value="trap">Ion Trap</option>
328 <option value="beam">Ion Beam</option>
329 </select>
330 </div>
331 <p class="help-block">
332 <small>
333 Ion storage: Ion Trap (IT) and ICR.
334 <br>Ion beam: Q or H collision Cell (QQQ, QQIT, QQ/TOF, Fusion).
335 </small>
336 </p>
337 <div class="form-group input-group has-success">
338 <span class="input-group-addon">Gas </span>
339 <select id="add1spectrum-ionTrapBeam-ionGas-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional ">
340 <option value="He">He</option>
341 <option value="N2">N2</option>
342 <option value="Ar">Ar</option>
343 </select>
344 </div>
345 <div class="form-group input-group has-warning">
346 <span class="input-group-addon">Gas pressure</span>
347 <input id="add1spectrum-ionTrapBeam-ionGasPressureValue-{{ TAB_INDEX_PLACEHOLDER }}" type="text" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional ">
348 <select id="add1spectrum-ionTrapBeam-ionGasPressureUnit-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional ">
349 <option value="" selected="selected" disabled="disabled">choose in list…</option>
350 <option value="mbar">mbar</option>
351 <option value="au">a.u.</option>
352 </select>
353 </div>
354 <div class="form-group input-group add1spectrum-ionTrap has-warning">
355 <span class="input-group-addon">Frequency Shift <small>(KHz)</small></span>
356 <input id="add1spectrum-ionTrapBeam-ionFrequencyShift-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g.: ...">
357 </div>
358 <div class="form-group input-group add1spectrum-ionTrap has-warning">
359 <span class="input-group-addon">Ion Number <small>(AGC or ICC)</small></span>
360 <input id="add1spectrum-ionTrapBeam-ionNumber-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g.: ...">
361 </div>
362 </div>
363 </div>
364 </div>
365 </div>
366 <div class="col-lg-12">
367 <div class="col-lg-8">
368 <br>
369 <button id="btnSwitch-gotoStep4-ms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(4);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
370 </div>
371 <div class="col-lg-4">&nbsp;</div>
372 </div>
373 </div>
374 </div>
375 </div>
376 <div id="add1spectrum-peaksData-MS-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
377 <div class="panel-heading panel-success">
378 <h4 class="panel-title">
379 <a id="linkActivateStep4-ms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step4-ms-{{ TAB_INDEX_PLACEHOLDER }}">
380 MS Peaks <i id="step4-ms-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
381 </a>
382 </h4>
383 </div>
384 <div id="step4-ms-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
385 <div class="panel-body">
386 <div class="col-lg-12">
387 <div class="form-group input-group col-lg-3 has-success">
388 <span class="input-group-addon">scan type</span>
389 <select style="width: 150px;" id="add1spectrum-peaksMS-msLevel-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory">
390 <option value="" disabled="disabled">choose in list…</option>
391 <option class="enable-if-ms" value="ms" selected="selected">ms</option>
392 <option class="enable-if-msms" value="ms2">ms2</option>
393 <!-- <option class="enable-if-msms" value="ms3" disabled="disabled">ms3</option> -->
394 </select>
395 </div>
396 <div class="form-group input-group col-lg-3 has-error">
397 <span class="input-group-addon">polarity</span>
398 <select style="width: 150px;" id="add1spectrum-peaksMS-polarity-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory">
399 <option value="" selected="selected" disabled="disabled">choose in list…</option>
400 <option value="positive">positive</option>
401 <option value="negative">negative</option>
402 </select>
403 </div>
404 <div class="form-group input-group col-lg-3 has-error">
405 <span class="input-group-addon">resolution</span>
406 <select style="width: 150px;" id="add1spectrum-peaksMS-resolution-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory">
407 <option value="" disabled="disabled">choose in list…</option>
408 <option value="low">low</option>
409 <option selected="selected" value="high">high</option>
410 </select>
411 </div>
412 <div class="form-group input-group col-lg-3 has-success">
413 <span class="input-group-addon">curation</span>
414 <select style="width: 150px;" id="add1spectrum-peaksMS-curation-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-optional">
415 <option value="no_curation" selected="selected">no curation</option>
416 <option value="peaks_RI_sup_1percent">Peaks RI &gt; 1%</option>
417 <option value="top_50_peaks">Top 50 peaks</option>
418 <option value="top_20_peaks">Top 20 peaks</option>
419 <option value="top_10_peaks">Top 10 peaks</option>
420 <option value="similar_chromatographic_profile">Similar chromatographic profile</option>
421 </select>
422 </div>
423 </div>
424 <br>
425 <div class="col-lg-12 opt-msms">
426 <hr><!--
427 <div class="form-group input-group col-lg-4 has-warning">
428 <span class="input-group-addon">precursor spectrum</span>
429 <select style="width: 150px;" id="add1spectrum-peaksMS-msPrecursor-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-optional">
430 <option value="" disabled="disabled">choose in list…</option>
431 </select>
432 </div> -->
433
434 <div class="form-group input-group col-lg-4 has-success">
435 <span class="input-group-addon">Isolation mode <i class="fa fa-question-circle" title="IT / Q / TOF / ICR"></i></span>
436 <select id="add1spectrum-peaksMS-isolationMode-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm is-optional add1spectrum-peaksMSForm-peaklist-reset">
437 <option value="" disabled="disabled">choose in list…</option>
438 <option value="IT">IT</option>
439 <option value="Q">Q</option>
440 <option value="TOF">TOF</option>
441 <option value="ICR">ICR</option>
442 </select>
443 </div>
444 <div class="form-group input-group col-lg-4 has-warning">
445 <span class="input-group-addon">Isolation window <i class="fa fa-question-circle" title="(+ / - value)"></i></span>
446 <input id="add1spectrum-peaksMS-isolationWindow-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ...">
447 </div>
448 <div class="form-group input-group col-lg-4 has-warning">
449 <span class="input-group-addon">qz isolation / activation <i class="fa fa-question-circle" title="if IT"></i> <small>(no unit)</small></span>
450 <input id="add1spectrum-peaksMS-qzIsolation-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ...">
451 </div>
452 <div class="form-group input-group col-lg-4 has-warning">
453 <span class="input-group-addon">Activation time <i class="fa fa-question-circle" title="if FT-ICR (SORI-CID) or IT"></i> <small>(ms)</small></span>
454 <input id="add1spectrum-peaksMS-activationTime-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ...">
455 </div>
456 <div class="form-group input-group col-lg-4 has-success">
457 <span class="input-group-addon">Mode <i class="fa fa-question-circle" title="HCD / CID / ECD /ETD"></i></span>
458 <select id="add1spectrum-peaksMS-mode-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm is-optional ">
459 <option value="" disabled="disabled">choose in list…</option>
460 <option value="HCD">HCD</option>
461 <option value="CID">CID</option>
462 <option value="ECD">ECD</option>
463 <option value="ETD">ETD</option>
464 </select>
465 </div>
466
467 <div class="form-group input-group col-lg-4 has-warning">
468 <span class="input-group-addon">Frag. energy <i class="fa fa-question-circle" title="without unit"></i> </span>
469 <input id="add1spectrum-peaksMS-frag-nrj-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms-in-msms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional" placeholder="e.g. ...">
470 </div>
471 </div>
472 <div class="col-lg-12">
473 <div class="form-group input-group col-lg-4 has-warning">
474 <span class="input-group-addon">Resolution FWHM <small>(resolution@mass)</small></span>
475 <input id="add1spectrum-analyzer-ms-resolutionFWHM-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional" placeholder="e.g. 6500@1000">
476 </div>
477 <div class="form-group input-group col-lg-4 has-error">
478 <span class="input-group-addon">m/z range <small>(ppm) from / to</small></span>
479 <input style="width: 100px;" id="add1spectrum-peaksMS-rangeFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="50" value="{{ DEFAULT_MIN_MZ }}">
480 <input style="width: 100px;" id="add1spectrum-peaksMS-rangeTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="500" value="{{ DEFAULT_MAX_MZ }}">
481 </div>
482 <div class="form-group input-group col-lg-4 has-error">
483 <span class="input-group-addon">retention time (min) <small>from / to</small></span>
484 <input style="width: 100px;" id="add1spectrum-peaksMS-rtMinFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="0.9" value="{{ DEFAULT_MIN_RT }}">
485 <input style="width: 100px;" id="add1spectrum-peaksMS-rtMinTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="1.4" value="{{ DEFAULT_MAX_RT }}">
486 </div>
487 </div>
488 <div class="col-lg-12">
489 <div class="form-group input-group col-lg-4 has-warning">
490 <span class="input-group-addon">retention time (% solvant) <small>from / to</small></span>
491 <input style="width: 100px;" id="add1spectrum-peaksMS-rtSolvFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-optional" placeholder="??">
492 <input style="width: 100px;" id="add1spectrum-peaksMS-rtSolvTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-optional" placeholder="??">
493 </div>
494 <div class="col-lg-4">&nbsp;</div>
495 </div>
496 <div class="col-lg-12">
497 <div class="col-lg-11">
498 <br>
499 <ul class="nav nav-tabs" style="margin-bottom: 15px;">
500 <li class="active"><a id="link-spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}" href="#spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="tab"><i class="fa fa-table"></i> Peak List</a></li>
501 <li class=""><a id="link-spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}" href="#spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().updateLCMSspectraViewer()" data-toggle="tab"><i class="fa fa-bar-chart-o"></i> Spectrum Preview</a></li>
502 </ul>
503 <div id="spectrum-signal-data-lcms-{{ TAB_INDEX_PLACEHOLDER }}" class="tab-content" style="">
504 <div class="tab-pane fade active in" id="spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}">
505 <div class="panel-body" style="padding: 0px;">
506 <div id="container_MS_Peaks-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable col-lg-6" style="display: inline-block;"></div>
507
508 <div class="form-group input-group col-lg-3 has-warning hidden-if-ms-in-msms">
509 <span class="input-group-addon">Precursor ion <small>(M/Z)</small><i class="fa fa-question-circle" title="2 digits of precision."></i></span>
510 <input id="add1spectrum-peaksMS-msPrecursorIon-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-mandatory add1spectrum-peaksMSForm-peaklist-reset enabled-if-ms-in-msms" placeholder="e.g. 123.45">
511 </div>
512 </div>
513 </div>
514 <div class="tab-pane fade" id="spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}">
515 <div id="containter-lcms-spectrum-preview-{{ TAB_INDEX_PLACEHOLDER }}" style="width: 80%;"></div>
516 </div>
517 </div>
518 </div>
519 </div>
520 <div class="col-lg-12">
521 <div class="col-lg-8">
522 <button class="btn btn-success" onclick="$('#add1spectrum-peaksMS-msPrecursorIon-{{ TAB_INDEX_PLACEHOLDER }}').change()">check</button>
523 <button id="btnSwitch-gotoStep5-ms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(5);" class="btn switchStep btn-primary"><i class="fa fa-arrow-circle-down"></i> Next!</button>
524 <br>
525 <br>
526 </div>
527 <div class="col-lg-4">&nbsp;</div>
528 </div>
529 </div>
530 </div>
531 </div>
532 <div id="add1spectrum-otherData-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
533 <div class="panel-heading panel-success">
534 <h4 class="panel-title">
535 <a id="linkActivateStep5-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step5-{{ TAB_INDEX_PLACEHOLDER }}">
536 Other <i id="step5sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
537 </a>
538 </h4>
539 </div>
540 <div id="step5-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
541 <div class="panel-body">
542 <div class="col-lg-12">
543 <div class="col-lg-6">
544 <div class="panel panel-default">
545 <div class="panel-heading">
546 <h3 class="panel-title">Ownership</h3>
547 </div>
548 <div class="panel-body">
549 <div class="form-group input-group has-error">
550 <span class="input-group-addon">data author(s)</span>
551 <input id="add1spectrum-other-author-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-mandatory" placeholder="enter your lab. / plateforme name" value="">
552 </div>
553 <div class="form-group input-group has-warning">
554 <span class="input-group-addon">data validator(s)</span>
555 <input id="add1spectrum-other-validator-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="name of the personne who checked all data in this file">
556 </div>
557 <div class="form-group input-group has-warning">
558 <span class="input-group-addon">acquisition date</span>
559 <input id="add1spectrum-other-date-{{ TAB_INDEX_PLACEHOLDER }}" data-date-format="yyyy-mm-dd" type="text" class="form-control add1spectrum add1spectrum-otherForm datepicker is-optional" value="" placeholder="2022-11-04">
560 </div>
561 <div class="form-group input-group has-warning">
562 <span class="input-group-addon">data ownership</span>
563 <input id="add1spectrum-other-owner-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="enter your lab. / plateforme name &amp; sample provider;">
564 </div>
565 </div>
566 </div>
567 </div>
568 <div class="col-lg-6">
569 <div class="panel panel-default">
570 <div class="panel-heading">
571 <h3 class="panel-title">Raw File</h3>
572 </div>
573 <div class="panel-body">
574 <div class="form-group input-group has-warning">
575 <span class="input-group-addon">raw file name</span>
576 <input id="add1spectrum-other-fileName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="needed to retrieve file later">
577 </div>
578 <div class="form-group input-group has-warning">
579 <span class="input-group-addon">raw file size (Ko)</span>
580 <input id="add1spectrum-other-fileSize-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="optional, to check if the file is correct">
581 </div>
582 </div>
583 </div>
584 </div>
585 </div>
586 <div class="col-lg-12">
587 <div class="col-lg-8">
588 <br>
589 <button id="btnSwitch-gotoStep6-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(6);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-right"></i> Validate this compound/mix!</button>
590 <!-- <button onclick="enable_tab({{ TAB_INDEX_PLACEHOLDER }})" class="btn btn-success">
591 <i class="fa fa-arrow-circle-right"></i>Modify this compound/mix!
592 </button> -->
593 <span id="import1SpectrumLoadingBare-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;"><img src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/img/ajax-loader.gif" title="please wait"></span>
594 <span id="import1SpectrumResults-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;">
595 <button id="btnSwitch-view-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="modal" data-target="#modalShowSpectra-{{ TAB_INDEX_PLACEHOLDER }}" class="btn btn-success"><i class="fa fa-eye"></i> View spectrum</button>
596 <button id="btnSwitch-returntoStep3-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-primary"><i class="fa fa-arrow-circle-up"></i> Add new peaklist!</button>
597 </span>
598 </div>
599 <div class="col-lg-4"><br><br><br></div>
600 </div>
601 <div class="col-lg-12">
602 <div class="col-lg-8">
603 <div id="alertBoxSubmitSpectrum-{{ TAB_INDEX_PLACEHOLDER }}" class="col-lg-6"></div>
604 </div>
605 <div class="col-lg-4">&nbsp;</div>
606 </div>
607 </div>
608 </div>
609 </div>
610 </div>
611 <script src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/dist/handsontable.full.min.js"></script>
612 <link rel="stylesheet" media="screen" href="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/dist/handsontable.full.min.css">
613 <link rel="stylesheet" media="screen" href="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/bootstrap/handsontable.bootstrap.min.css">
614 </div>
615 <div class="modal" id="modalPickCompound-{{ TAB_INDEX_PLACEHOLDER }}" tabindex="-1" role="dialog" aria-labelledby="modalPickCompoundLabel-{{ TAB_INDEX_PLACEHOLDER }}" aria-hidden="true">
616 <div class="modal-dialog">
617 <div class="modal-content">
618 <div class="modal-header">
619 <button type="button" class="close" data-dismiss="modal" aria-hidden="true">×</button>
620 <h4 class="modal-title" id="modalPickCompoundLabel-{{ TAB_INDEX_PLACEHOLDER }}">Pick a compound</h4>
621 </div>
622 <div class="modal-body">
623 <div class="form-group input-group">
624 <span class="input-group-addon">Compound Name</span>
625 <input id="add-one-cc-s1-value-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control" placeholder="e.g. Caffeine" type="text">
626 <span class="input-group-btn">
627 <button class="btn btn-default" type="button" onclick="ctx().searchLocalCompound();">
628 <i class="fa fa-search"></i>
629 </button>
630 </span>
631 </div>
632 <div id="load-step-1-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;">
633 <img src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/img/ajax-loader.gif" title="please wait">
634 </div>
635 <div id="ok-step-1-{{ TAB_INDEX_PLACEHOLDER }}" style="overflow: auto; max-height: 300px;"></div>
636 </div>
637 <div class="modal-footer">
638 <button type="button" class="btn btn-danger" data-dismiss="modal" onclick="ctx().clearLine()">
639 <i class="fa fa-eraser"></i> Clear
640 </button>
641 <button type="button" class="btn btn-default" data-dismiss="modal">Fermer</button>
642 </div>
643 </div>
644 </div>
645 </div>
646 <div class="modal " id="modalShowSpectra-{{ TAB_INDEX_PLACEHOLDER }}" tabindex="-1" role="dialog" aria-labelledby="modalShowSpectraLabel-{{ TAB_INDEX_PLACEHOLDER }}" aria-hidden="true">
647 <div class="modal-dialog">
648 <div class="modal-content">
649 <div class="modal-header">
650 <button type="button" class="close" data-dismiss="modal" aria-hidden="true">×</button>
651 <h4 class="modal-title" id="modalShowSpectraLabel-{{ TAB_INDEX_PLACEHOLDER }}">Modal title</h4>
652 </div>
653 <div class="modal-body">
654 <div class="te"></div>
655 </div>
656 <div class="modal-footer">
657 </div>
658 </div>
659 </div>
660 </div>