Mercurial > repos > lain > ms_to_peakforest_it
comparison src/compound-ref.html @ 1:7e3085fc60c1 draft default tip
master branch Updating
| author | lain |
|---|---|
| date | Wed, 30 Aug 2023 14:21:18 +0000 |
| parents | |
| children |
comparison
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| 0:b58b229c4cbf | 1:7e3085fc60c1 |
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| 1 <div class="tab-pane fade {{ ACTIVE_TAB_PLACEHOLDER }} in" id="tab-index-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 2 <div class="panel-group" id="accordion-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 3 <div class="panel panel-default"> | |
| 4 <div class="panel-heading panel-success"> | |
| 5 <h4 class="panel-title"> | |
| 6 <a data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step0-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 7 Spectrum Type <i id="step0sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 8 </a> | |
| 9 </h4> | |
| 10 </div> | |
| 11 <div id="step0-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse in"> | |
| 12 <div class="panel-body"> | |
| 13 <button class="btn btn-disabled" disabled="disabled"><i class="fa fa-plus-circle"></i> GC-MS spectrum</button> | |
| 14 <button id="set_LC_MS_spectrum_button" class="btn btn-primary" onclick="ctx().addOneSpectrum(2);"><i class="fa fa-plus-circle"></i> LC-MS spectrum</button> | |
| 15 <button id="set_LC_MSMS_spectrum_button" class="btn btn-primary" onclick="ctx().addOneSpectrum(5);"><i class="fa fa-plus-circle"></i> LC-MSMS spectrum</button> | |
| 16 </div> | |
| 17 </div> | |
| 18 </div> | |
| 19 <div id="add1spectrum-sampleData-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;"> | |
| 20 <div class="panel-heading panel-success"> | |
| 21 <h4 class="panel-title"> | |
| 22 <a id="linkActivateStep1-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step1-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 23 Sample Type <i id="step1sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 24 </a> | |
| 25 </h4> | |
| 26 </div> | |
| 27 <div id="step1-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse"> | |
| 28 <div class="panel-body"> | |
| 29 <div class="col-lg-12"> | |
| 30 <div class="col-lg-8"> | |
| 31 <div class="panel panel-default"> | |
| 32 <div class="panel-heading"> | |
| 33 <div class="form-group input-group has-error"> | |
| 34 <span class="input-group-addon">Sample Type</span> | |
| 35 <select id="add1spectrum-sample-type-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-sampleForm is-mandatory"> | |
| 36 <option value="" selected="selected" disabled="disabled">choose in list…</option> | |
| 37 <option value="compound-ref">Ref. Chemical Compound</option> | |
| 38 </select> | |
| 39 </div> | |
| 40 </div> | |
| 41 <div class="panel-body"> | |
| 42 <div id="add1spectrum-sample-type-compound-ref-{{ TAB_INDEX_PLACEHOLDER }}" class="add1spectrum-sample-type-panel" style="display:none;"> | |
| 43 <div class="form-group input-group has-error"> | |
| 44 <span class="input-group-addon">InChIKey</span> | |
| 45 <input id="add1spectrum-sample-inchikey-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-mandatory" placeholder="e.g. RYYVLZVUVIJVGH-UHFFFAOYSA-N"> | |
| 46 <span class="input-group-btn"> | |
| 47 <button class="btn btn-default" type="button" onclick="ctx().pickChemicalCompound();"> | |
| 48 <i class="fa fa-search"></i> | |
| 49 </button> | |
| 50 </span> | |
| 51 </div> | |
| 52 <div class="form-group input-group has-warning"> | |
| 53 <span class="input-group-addon">concentration <small>(mmol/L)</small></span> | |
| 54 <input id="add1spectrum-sample-concentration-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="42"> | |
| 55 </div> | |
| 56 <div class="form-group input-group opt-ms has-warning" style="display: none;"> | |
| 57 <span class="input-group-addon">solvent</span> | |
| 58 <select id="add1spectrum-sample-lcmsSolvent-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-sampleForm is-optional"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="none" class="">none</option><option value="H2O" class="">H2O</option><option value="3/5 in H2O + 0.1% AF/ ACN + 0.1% AF (50/50, V/V)" class="">3/5 in H2O + 0.1% AF/ ACN + 0.1% AF (50/50, V/V)</option><option value="ACN/H2O (1/1, V/V)" class="">ACN/H2O (1/1, v/v)</option><option value="CH3OH/H2O (1/1, V/V)" class="">CH3OH/H2O (1/1, v/v)</option><option value="H2O/ACN (40/60)" class="">H2O/ACN (40/60)</option><option value="H2O/ACN (95/5)" class="">H2O/ACN (95/5)</option><option value="H20+0.1% FORMIC ACID / ACN+0.1% FORMIC ACID (50/50, V/V)" class="">H20+0.1% Formic Acid / ACN+0.1% Formic Acid (50/50, V/V)</option></select> | |
| 59 </div> | |
| 60 <div class="form-group input-group has-warning"> | |
| 61 <span class="input-group-addon">InChI</span> | |
| 62 <input id="add1spectrum-sample-inchi-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="e.g. InChI=1S/C8H10N4O2/c1-10-4-9-6-5(10)7(13)12(3)8(14)11(6)2/h4H,1-3H3"> | |
| 63 </div> | |
| 64 <div class="form-group input-group has-warning"> | |
| 65 <span class="input-group-addon">Molecule common name</span> | |
| 66 <input id="add1spectrum-sample-commonName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="e.g. Caffeine"> | |
| 67 </div> | |
| 68 </div> | |
| 69 <div id="add1spectrum-sample-type-rcc-added-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default add1spectrum-sample-type-panel" style="display:none;"> | |
| 70 <div class="panel-heading"> | |
| 71 <h3 class="panel-title">Reference compound added</h3> | |
| 72 </div> | |
| 73 <div class="panel-body" style="padding: 0px;"> | |
| 74 <div id="container_RCC_ADDED-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable"></div> | |
| 75 </div> | |
| 76 </div> | |
| 77 </div> | |
| 78 </div> | |
| 79 </div> | |
| 80 <div class="col-lg-4"> | |
| 81 <div id="sample-bonus-display-{{ TAB_INDEX_PLACEHOLDER }}"></div> | |
| 82 | |
| 83 </div> | |
| 84 </div> | |
| 85 <div class="col-lg-12"> | |
| 86 <div class="col-lg-8"> | |
| 87 <br> | |
| 88 <button id="btnSwitch-gotoStep2-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(2);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button> | |
| 89 </div> | |
| 90 <div class="col-lg-4"> </div> | |
| 91 </div> | |
| 92 </div> | |
| 93 </div> | |
| 94 </div> | |
| 95 <div id="add1spectrum-chromatographyData-LC-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;"> | |
| 96 <div class="panel-heading panel-success"> | |
| 97 <h4 class="panel-title"> | |
| 98 <a id="linkActivateStep2-lc-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step2-lc-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 99 Liquid Chromatography <i id="step2-lc-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 100 </a> | |
| 101 </h4> | |
| 102 </div> | |
| 103 <div id="step2-lc-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse"> | |
| 104 <div class="panel-body"> | |
| 105 <div class="col-lg-12"> | |
| 106 <div class="col-lg-6"> | |
| 107 <div class="panel panel-default"> | |
| 108 <div class="panel-heading"> | |
| 109 <h3 class="panel-title">Chromatography Param.</h3> | |
| 110 </div> | |
| 111 <div class="panel-body"> | |
| 112 <div class="form-group input-group has-error"> | |
| 113 <span class="input-group-addon">Method</span> | |
| 114 <select | |
| 115 id="add1spectrum-chromatoLC-method-{{ TAB_INDEX_PLACEHOLDER }}" | |
| 116 class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" | |
| 117 ></select> | |
| 118 </div> | |
| 119 <div id="alertBoxSelectTemplate-{{ TAB_INDEX_PLACEHOLDER }}"></div> | |
| 120 <div class="form-group input-group has-error"> | |
| 121 <span class="input-group-addon">Column constructor</span> | |
| 122 <select id="add1spectrum-chromatoLC-colConstructor-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="Agilent">Agilent</option><option value="alltech">Alltech</option><option value="CIL cluzeau">Cil cluzeau</option><option value="Daicel">Daicel</option><option value="Hypersil">Hypersil</option><option value="Interchim">Interchim</option><option value="Macherey nagel">Macherey nagel</option><option value="Merck">Merck</option><option value="Phenomenex">Phenomenex</option><option value="Shiseido">Shiseido</option><option value="Supelco (sigma-aldrich)">Supelco (sigma-aldrich)</option><option value="Thermo">Thermo</option><option value="Vydac">Vydac</option><option value="Waters">Waters</option><option value="YMC">YMC</option><option value="other">Other</option></select> | |
| 123 </div> | |
| 124 <div class="form-group input-group "> | |
| 125 <span class="input-group-addon">Column constructor (other)</span> | |
| 126 <input id="add1spectrum-chromatoLC-colConstructorOther-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm" disabled="disabled" placeholder="e.g. HAL 9000"> | |
| 127 </div> | |
| 128 <div class="form-group input-group has-warning"> | |
| 129 <span class="input-group-addon">Column name</span> | |
| 130 <input id="add1spectrum-chromatoLC-colName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. UPLC HSS T3"> | |
| 131 </div> | |
| 132 <div class="form-group input-group has-error"> | |
| 133 <span class="input-group-addon">Column length (mm)</span> | |
| 134 <input id="add1spectrum-chromatoLC-colLength-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 150"> | |
| 135 </div> | |
| 136 <div class="form-group input-group has-error"> | |
| 137 <span class="input-group-addon">Column diameter (mm)</span> | |
| 138 <input id="add1spectrum-chromatoLC-colDiameter-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 2.1"> | |
| 139 </div> | |
| 140 <div class="form-group input-group has-error"> | |
| 141 <span class="input-group-addon">Particule size (µm)</span> | |
| 142 <input id="add1spectrum-chromatoLC-colParticuleSize-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 1.8"> | |
| 143 </div> | |
| 144 <div class="form-group input-group has-warning"> | |
| 145 <span class="input-group-addon">Column temperature (°C)</span> | |
| 146 <input id="add1spectrum-chromatoLC-colTemperature-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 30"> | |
| 147 </div> | |
| 148 <div class="form-group input-group has-error"> | |
| 149 <span class="input-group-addon">LC mode</span> | |
| 150 <select id="add1spectrum-chromatoLC-LCMode-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"> | |
| 151 <option value="" selected="selected" disabled="disabled">choose in list…</option> | |
| 152 <option value="Gradient">Gradient</option> | |
| 153 <option value="Isocratic">Isocratic</option> | |
| 154 </select> | |
| 155 </div> | |
| 156 <div class="form-group input-group has-warning"> | |
| 157 <span class="input-group-addon">Separation flow rate (µL/min)</span> | |
| 158 <input id="add1spectrum-chromatoLC-separationFlowRate-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 400"> | |
| 159 </div> | |
| 160 <div class="form-group input-group has-error"> | |
| 161 <span class="input-group-addon">Separation solvent A</span> | |
| 162 <select id="add1spectrum-chromatoLC-separationSolvA-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="5% ACN + 0.1% FA in H2O">5% ACN + 0.1% FA in H2O</option><option value="10% ACN + 0.1% FA in H2O">10% ACN + 0.1% FA in H2O</option><option value="10mM (NH4)2CO3 / ACN (20/80) (v/v)">10mM (NH4)2CO3 / ACN (20/80) (v/v)</option><option value="Acetonitrile">Acetonitrile</option><option value="Acetonitrile + 0.1% Formic Acid">Acetonitrile + 0.1% Formic Acid</option><option value="H2O + 0.1% Formic Acid">H2O + 0.1% Formic Acid</option><option value="H2O, ammonium carbonate 10 mM, pH10.5">H2O, ammonium carbonate 10 mM, pH10.5</option><option value="H2O, ammonium acetate 2.5 mM">H2O, ammonium acetate 2.5 mM</option><option value="H2O / CH3OH / CH3CO2H (95/5/0.1)">H2O / CH3OH / CH3CO2H (95/5/0.1)</option><option value="Methanol">Methanol</option><option value="Methanol / H2O (1/1)">Methanol / H2O (1/1)</option><option value="Methanol / H2O (1/1), 0.1% FA">Methanol / H2O (1/1), 0.1% FA</option><option value="Methanol / CH3CO2H (100/0.1)">Methanol / CH3CO2H (100/0.1)</option><option value="Methanol / ACN (60/40) ammonium acetate 2.5 mM">Methanol / ACN (60/40) ammonium acetate 2.5 mM</option></select> | |
| 163 </div> | |
| 164 <div class="form-group input-group has-warning"> | |
| 165 <span class="input-group-addon">pH solvent A (if acqueous solvant)</span> | |
| 166 <input id="add1spectrum-chromatoLC-separationSolvApH-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 7.0"> | |
| 167 </div> | |
| 168 <div class="form-group input-group has-error"> | |
| 169 <span class="input-group-addon">Separation solvent B</span> | |
| 170 <select id="add1spectrum-chromatoLC-separationSolvB-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="5% ACN + 0.1% FA in H2O">5% ACN + 0.1% FA in H2O</option><option value="10% ACN + 0.1% FA in H2O">10% ACN + 0.1% FA in H2O</option><option value="10mM (NH4)2CO3 / ACN (20/80) (v/v)">10mM (NH4)2CO3 / ACN (20/80) (v/v)</option><option value="Acetonitrile">Acetonitrile</option><option value="Acetonitrile + 0.1% Formic Acid">Acetonitrile + 0.1% Formic Acid</option><option value="H2O + 0.1% Formic Acid">H2O + 0.1% Formic Acid</option><option value="H2O, ammonium carbonate 10 mM, pH10.5">H2O, ammonium carbonate 10 mM, pH10.5</option><option value="H2O, ammonium acetate 2.5 mM">H2O, ammonium acetate 2.5 mM</option><option value="H2O / CH3OH / CH3CO2H (95/5/0.1)">H2O / CH3OH / CH3CO2H (95/5/0.1)</option><option value="Methanol">Methanol</option><option value="Methanol / H2O (1/1)">Methanol / H2O (1/1)</option><option value="Methanol / H2O (1/1), 0.1% FA">Methanol / H2O (1/1), 0.1% FA</option><option value="Methanol / CH3CO2H (100/0.1)">Methanol / CH3CO2H (100/0.1)</option><option value="Methanol / ACN (60/40) ammonium acetate 2.5 mM">Methanol / ACN (60/40) ammonium acetate 2.5 mM</option></select> | |
| 171 </div> | |
| 172 <div class="form-group input-group has-warning"> | |
| 173 <span class="input-group-addon">pH solvent B (if acqueous solvant)</span> | |
| 174 <input id="add1spectrum-chromatoLC-separationSolvBApH-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 7.0"> | |
| 175 </div> | |
| 176 </div> | |
| 177 </div> | |
| 178 </div> | |
| 179 <div class="col-lg-6"> | |
| 180 <div class="panel panel-default"> | |
| 181 <div class="panel-heading"> | |
| 182 <h3 class="panel-title">Separation flow gradient</h3> | |
| 183 </div> | |
| 184 <div class="panel-body" style="padding: 0px;"> | |
| 185 <div id="container_LC_SFG-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable"></div> | |
| 186 </div> | |
| 187 </div> | |
| 188 </div> | |
| 189 </div> | |
| 190 <div class="col-lg-12"> | |
| 191 <div class="col-lg-8"> | |
| 192 <br> | |
| 193 <button id="btnSwitch-gotoStep3-lc-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button> | |
| 194 </div> | |
| 195 <div class="col-lg-4"> </div> | |
| 196 </div> | |
| 197 </div> | |
| 198 </div> | |
| 199 </div> | |
| 200 <div id="add1spectrum-chromatographyData-GC-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;"> | |
| 201 <div class="panel-heading panel-success"> | |
| 202 <h4 class="panel-title"> | |
| 203 <a id="linkActivateStep2-gc-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step2-gc-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 204 Gaz Chromatography <i id="step2-gc-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 205 </a> | |
| 206 </h4> | |
| 207 </div> | |
| 208 <div id="step2-gc-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse"> | |
| 209 <div class="panel-body"> | |
| 210 <div class="col-lg-12"> | |
| 211 <div class="col-lg-6"> | |
| 212 i <3 GC | |
| 213 </div> | |
| 214 <div class="col-lg-6"> </div> | |
| 215 </div> | |
| 216 <div class="col-lg-12"> | |
| 217 <div class="col-lg-8"> | |
| 218 <br> | |
| 219 <button id="btnSwitch-gotoStep3-gc-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button> | |
| 220 </div> | |
| 221 <div class="col-lg-4"> </div> | |
| 222 </div> | |
| 223 </div> | |
| 224 </div> | |
| 225 </div> | |
| 226 <div id="add1spectrum-analyserData-MS-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;"> | |
| 227 <div class="panel-heading panel-success"> | |
| 228 <h4 class="panel-title"> | |
| 229 <a id="linkActivateStep3-ms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step3-ms-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 230 MS Analyzer <i id="step3-ms-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 231 </a> | |
| 232 </h4> | |
| 233 </div> | |
| 234 <div id="step3-ms-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse"> | |
| 235 <div class="panel-body"> | |
| 236 <div class="col-lg-12"> | |
| 237 <div class="col-lg-6"> | |
| 238 <br> | |
| 239 <div class="panel panel-default"> | |
| 240 <div class="panel-heading"> | |
| 241 <h3 class="panel-title">Analyzer</h3> | |
| 242 </div> | |
| 243 <div class="panel-body"> | |
| 244 <div class="form-group input-group has-error"> | |
| 245 <span class="input-group-addon">Instrument</span> | |
| 246 <input id="add1spectrum-analyzer-ms-instrument-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory" placeholder="e.g. Q-TOF; LTQ - Orbitrap"> | |
| 247 </div> | |
| 248 <div class="form-group input-group has-warning"> | |
| 249 <span class="input-group-addon">Model</span> | |
| 250 <input id="add1spectrum-analyzer-ms-model-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. QToF micro (Micromass Waters); XL; Impact II; ..."> | |
| 251 </div> | |
| 252 <div class="form-group"> | |
| 253 <div class="form-group input-group has-error"> | |
| 254 <span class="input-group-addon">Ion analyzer Type</span> | |
| 255 <input id="add1spectrum-analyzer-ms-ionAnalyzerType-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory" placeholder="e.g. QTOF; QQQ; ..."> | |
| 256 </div> | |
| 257 <p class="help-block"> | |
| 258 <small> | |
| 259 Ion analyzer types are "B", "E", "FT" (include other types using FT like FTICR or Orbitrap), "IT", "Q", "TOF" (e.g.: "QTOF", "QQQ", "EB", "ITFT"); | |
| 260 for further informations please refer to <a target="_BLANK" href="https://github.com/MassBank/MassBank-web/blob/main/Documentation/MassBankRecordFormat.md#212-record_title">MassBank Record documentation</a>. | |
| 261 </small> | |
| 262 </p> | |
| 263 </div> | |
| 264 </div> | |
| 265 </div> | |
| 266 </div> | |
| 267 <div class="col-lg-6"> | |
| 268 <br> | |
| 269 <div class="panel panel-default"> | |
| 270 <div class="panel-heading"> | |
| 271 <h3 class="panel-title">Molecule Ionization</h3> | |
| 272 </div> | |
| 273 <div class="panel-body"> | |
| 274 <div class="form-group input-group has-error"> | |
| 275 <span class="input-group-addon">Ionization method <small>(POS/NEG)</small></span> | |
| 276 <select id="add1spectrum-analyzserMS-ionizationMethod-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory one-or-more"> | |
| 277 <option value="" selected="selected" disabled="disabled">choose in list… (POS)</option> | |
| 278 <option value="ACPI">ACPI</option><option value="APPI">APPI</option><option value="EI">EI</option><option value="ESI">ESI</option><option value="FAB">FAB</option><option value="MALDI">MALDI</option></select> | |
| 279 <select id="add1spectrum-analyzserMS-ionizationMethod-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory one-or-more"> | |
| 280 <option value="" selected="selected" disabled="disabled">choose in list… (NEG)</option> | |
| 281 <option value="ACPI">ACPI</option><option value="APPI">APPI</option><option value="EI">EI</option><option value="ESI">ESI</option><option value="FAB">FAB</option><option value="MALDI">MALDI</option></select> | |
| 282 </div> | |
| 283 <div class="form-group input-group has-warning"> | |
| 284 <span class="input-group-addon">Spray (needle) gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span> | |
| 285 <input id="add1spectrum-analyzserMS-sprayGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (POS)"> | |
| 286 <input id="add1spectrum-analyzserMS-sprayGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 20 (NEG)"> | |
| 287 </div> | |
| 288 <div class="form-group input-group has-warning"> | |
| 289 <span class="input-group-addon">Vaporizer gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span> | |
| 290 <input id="add1spectrum-analyzserMS-vaporizerGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 10 (POS)"> | |
| 291 <input id="add1spectrum-analyzserMS-vaporizerGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 5 (NEG)"> | |
| 292 </div> | |
| 293 <div class="form-group input-group has-warning"> | |
| 294 <span class="input-group-addon">Vaporizer temperature <br><small>(°C, POS/NEG)</small></span> | |
| 295 <input id="add1spectrum-analyzserMS-vaporizerTemperature-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 330 (POS)"> | |
| 296 <input id="add1spectrum-analyzserMS-vaporizerTemperature-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 330 (NEG)"> | |
| 297 </div> | |
| 298 <div class="form-group input-group has-warning"> | |
| 299 <span class="input-group-addon">Source gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span> | |
| 300 <input id="add1spectrum-analyzserMS-sourceGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (POS)"> | |
| 301 <input id="add1spectrum-analyzserMS-sourceGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (NEG)"> | |
| 302 </div> | |
| 303 <div class="form-group input-group has-warning"> | |
| 304 <span class="input-group-addon">Ion transfer tube temperature <br> Transfer capillary temperature <small>(°C, POS/NEG)</small></span> | |
| 305 <input id="add1spectrum-analyzserMS-ionTransferTubeTemperatureOrTransferCapillaryTemperature-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 350 (POS)"> | |
| 306 <input id="add1spectrum-analyzserMS-ionTransferTubeTemperatureOrTransferCapillaryTemperature-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 350 (NEG)"> | |
| 307 </div> | |
| 308 <div class="form-group input-group has-warning"> | |
| 309 <span class="input-group-addon">High voltage (ESI) <br> Corona voltage (APCI) <small>(in kV, POS/NEG)</small></span> | |
| 310 <input id="add1spectrum-analyzserMS-highVoltageOrCoronaVoltage-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 3.5 (POS)"> | |
| 311 <input id="add1spectrum-analyzserMS-highVoltageOrCoronaVoltage-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 2.8 (NEG)"> | |
| 312 </div> | |
| 313 </div> | |
| 314 </div> | |
| 315 </div> | |
| 316 <div class="col-lg-6 opt-msms"> | |
| 317 <br> | |
| 318 <div class="panel panel-default"> | |
| 319 <div class="panel-heading"> | |
| 320 <h3 class="panel-title">Ion Storage / Ion Beam</h3> | |
| 321 </div> | |
| 322 <div class="panel-body"> | |
| 323 <div class="form-group input-group has-warning"> | |
| 324 <span class="input-group-addon">Type <small>(storage / beam)</small></span> | |
| 325 <select id="add1spectrum-ionTrapBeam-type-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional one-or-more"> | |
| 326 <option value="" selected="selected" disabled="disabled">choose in list…</option> | |
| 327 <option value="trap">Ion Trap</option> | |
| 328 <option value="beam">Ion Beam</option> | |
| 329 </select> | |
| 330 </div> | |
| 331 <p class="help-block"> | |
| 332 <small> | |
| 333 Ion storage: Ion Trap (IT) and ICR. | |
| 334 <br>Ion beam: Q or H collision Cell (QQQ, QQIT, QQ/TOF, Fusion). | |
| 335 </small> | |
| 336 </p> | |
| 337 <div class="form-group input-group has-success"> | |
| 338 <span class="input-group-addon">Gas </span> | |
| 339 <select id="add1spectrum-ionTrapBeam-ionGas-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional "> | |
| 340 <option value="He">He</option> | |
| 341 <option value="N2">N2</option> | |
| 342 <option value="Ar">Ar</option> | |
| 343 </select> | |
| 344 </div> | |
| 345 <div class="form-group input-group has-warning"> | |
| 346 <span class="input-group-addon">Gas pressure</span> | |
| 347 <input id="add1spectrum-ionTrapBeam-ionGasPressureValue-{{ TAB_INDEX_PLACEHOLDER }}" type="text" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional "> | |
| 348 <select id="add1spectrum-ionTrapBeam-ionGasPressureUnit-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional "> | |
| 349 <option value="" selected="selected" disabled="disabled">choose in list…</option> | |
| 350 <option value="mbar">mbar</option> | |
| 351 <option value="au">a.u.</option> | |
| 352 </select> | |
| 353 </div> | |
| 354 <div class="form-group input-group add1spectrum-ionTrap has-warning"> | |
| 355 <span class="input-group-addon">Frequency Shift <small>(KHz)</small></span> | |
| 356 <input id="add1spectrum-ionTrapBeam-ionFrequencyShift-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g.: ..."> | |
| 357 </div> | |
| 358 <div class="form-group input-group add1spectrum-ionTrap has-warning"> | |
| 359 <span class="input-group-addon">Ion Number <small>(AGC or ICC)</small></span> | |
| 360 <input id="add1spectrum-ionTrapBeam-ionNumber-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g.: ..."> | |
| 361 </div> | |
| 362 </div> | |
| 363 </div> | |
| 364 </div> | |
| 365 </div> | |
| 366 <div class="col-lg-12"> | |
| 367 <div class="col-lg-8"> | |
| 368 <br> | |
| 369 <button id="btnSwitch-gotoStep4-ms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(4);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button> | |
| 370 </div> | |
| 371 <div class="col-lg-4"> </div> | |
| 372 </div> | |
| 373 </div> | |
| 374 </div> | |
| 375 </div> | |
| 376 <div id="add1spectrum-peaksData-MS-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;"> | |
| 377 <div class="panel-heading panel-success"> | |
| 378 <h4 class="panel-title"> | |
| 379 <a id="linkActivateStep4-ms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step4-ms-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 380 MS Peaks <i id="step4-ms-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 381 </a> | |
| 382 </h4> | |
| 383 </div> | |
| 384 <div id="step4-ms-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse"> | |
| 385 <div class="panel-body"> | |
| 386 <div class="col-lg-12"> | |
| 387 <!-- | |
| 388 <div class="form-group input-group col-lg-3 has-success"> | |
| 389 <span class="input-group-addon">scan type</span> | |
| 390 <select style="width: 150px;" id="add1spectrum-peaksMS-msLevel-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory"> | |
| 391 <option value="" disabled="disabled">choose in list…</option> | |
| 392 <option class="enable-if-ms" value="ms" selected="selected">ms</option> | |
| 393 <option class="enable-if-msms" value="ms2">ms2</option> | |
| 394 </select> | |
| 395 </div> | |
| 396 --> | |
| 397 <div class="form-group input-group col-lg-3 has-error"> | |
| 398 <span class="input-group-addon">polarity</span> | |
| 399 <select style="width: 150px;" id="add1spectrum-peaksMS-polarity-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory"> | |
| 400 <option value="" selected="selected" disabled="disabled">choose in list…</option> | |
| 401 <option value="positive">positive</option> | |
| 402 <option value="negative">negative</option> | |
| 403 </select> | |
| 404 </div> | |
| 405 <div class="form-group input-group col-lg-3 has-error"> | |
| 406 <span class="input-group-addon">resolution</span> | |
| 407 <select style="width: 150px;" id="add1spectrum-peaksMS-resolution-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory"> | |
| 408 <option value="" disabled="disabled">choose in list…</option> | |
| 409 <option value="low">low</option> | |
| 410 <option selected="selected" value="high">high</option> | |
| 411 </select> | |
| 412 </div> | |
| 413 <div class="form-group input-group col-lg-3 has-success"> | |
| 414 <span class="input-group-addon">curation</span> | |
| 415 <select style="width: 150px;" id="add1spectrum-peaksMS-curation-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-optional"> | |
| 416 <option value="no_curation" selected="selected">no curation</option> | |
| 417 <option value="peaks_RI_sup_1percent">Peaks RI > 1%</option> | |
| 418 <option value="top_50_peaks">Top 50 peaks</option> | |
| 419 <option value="top_20_peaks">Top 20 peaks</option> | |
| 420 <option value="top_10_peaks">Top 10 peaks</option> | |
| 421 <option value="similar_chromatographic_profile">Similar chromatographic profile</option> | |
| 422 </select> | |
| 423 </div> | |
| 424 </div> | |
| 425 <br> | |
| 426 <div class="col-lg-12 opt-msms"> | |
| 427 <hr><!-- | |
| 428 <div class="form-group input-group col-lg-4 has-warning"> | |
| 429 <span class="input-group-addon">precursor spectrum</span> | |
| 430 <select style="width: 150px;" id="add1spectrum-peaksMS-msPrecursor-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-optional"> | |
| 431 <option value="" disabled="disabled">choose in list…</option> | |
| 432 </select> | |
| 433 </div> --> | |
| 434 | |
| 435 <div class="form-group input-group col-lg-4 has-success"> | |
| 436 <span class="input-group-addon">Isolation mode <i class="fa fa-question-circle" title="IT / Q / TOF / ICR"></i></span> | |
| 437 <select id="add1spectrum-peaksMS-isolationMode-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm is-optional add1spectrum-peaksMSForm-peaklist-reset"> | |
| 438 <option value="" disabled="disabled">choose in list…</option> | |
| 439 <option value="IT">IT</option> | |
| 440 <option value="Q">Q</option> | |
| 441 <option value="TOF">TOF</option> | |
| 442 <option value="ICR">ICR</option> | |
| 443 </select> | |
| 444 </div> | |
| 445 <div class="form-group input-group col-lg-4 has-warning"> | |
| 446 <span class="input-group-addon">Isolation window <i class="fa fa-question-circle" title="(+ / - value)"></i></span> | |
| 447 <input id="add1spectrum-peaksMS-isolationWindow-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ..."> | |
| 448 </div> | |
| 449 <div class="form-group input-group col-lg-4 has-warning"> | |
| 450 <span class="input-group-addon">qz isolation / activation <i class="fa fa-question-circle" title="if IT"></i> <small>(no unit)</small></span> | |
| 451 <input id="add1spectrum-peaksMS-qzIsolation-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ..."> | |
| 452 </div> | |
| 453 <div class="form-group input-group col-lg-4 has-warning"> | |
| 454 <span class="input-group-addon">Activation time <i class="fa fa-question-circle" title="if FT-ICR (SORI-CID) or IT"></i> <small>(ms)</small></span> | |
| 455 <input id="add1spectrum-peaksMS-activationTime-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ..."> | |
| 456 </div> | |
| 457 <div class="form-group input-group col-lg-4 has-success"> | |
| 458 <span class="input-group-addon">Mode <i class="fa fa-question-circle" title="HCD / CID / ECD /ETD"></i></span> | |
| 459 <select id="add1spectrum-peaksMS-mode-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm is-optional "> | |
| 460 <option value="" disabled="disabled">choose in list…</option> | |
| 461 <option value="HCD">HCD</option> | |
| 462 <option value="CID">CID</option> | |
| 463 <option value="ECD">ECD</option> | |
| 464 <option value="ETD">ETD</option> | |
| 465 </select> | |
| 466 </div> | |
| 467 | |
| 468 <div class="form-group input-group col-lg-4 has-warning"> | |
| 469 <span class="input-group-addon">Frag. energy <i class="fa fa-question-circle" title="without unit"></i> </span> | |
| 470 <input id="add1spectrum-peaksMS-frag-nrj-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional" placeholder="e.g. ..."> | |
| 471 </div> | |
| 472 </div> | |
| 473 <div class="col-lg-12"> | |
| 474 <div class="form-group input-group col-lg-4 has-warning"> | |
| 475 <span class="input-group-addon">Resolution FWHM <small>(resolution@mass)</small></span> | |
| 476 <input id="add1spectrum-analyzer-ms-resolutionFWHM-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional" placeholder="e.g. 6500@1000"> | |
| 477 </div> | |
| 478 <div class="form-group input-group col-lg-4 has-error"> | |
| 479 <span class="input-group-addon">m/z range <small>(ppm) from / to</small></span> | |
| 480 <input style="width: 100px;" id="add1spectrum-peaksMS-rangeFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="50" value="{{ DEFAULT_MIN_MZ }}"> | |
| 481 <input style="width: 100px;" id="add1spectrum-peaksMS-rangeTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="500" value="{{ DEFAULT_MAX_MZ }}"> | |
| 482 </div> | |
| 483 <div class="form-group input-group col-lg-4 has-error"> | |
| 484 <span class="input-group-addon">retention time (min) <small>from / to</small></span> | |
| 485 <input style="width: 100px;" id="add1spectrum-peaksMS-rtMinFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="0.9" value="{{ DEFAULT_MIN_RT }}"> | |
| 486 <input style="width: 100px;" id="add1spectrum-peaksMS-rtMinTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="1.4" value="{{ DEFAULT_MAX_RT }}"> | |
| 487 </div> | |
| 488 </div> | |
| 489 <div class="col-lg-12"> | |
| 490 <div class="form-group input-group col-lg-4 has-warning"> | |
| 491 <span class="input-group-addon">retention time (% solvant) <small>from / to</small></span> | |
| 492 <input style="width: 100px;" id="add1spectrum-peaksMS-rtSolvFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-optional" placeholder="??"> | |
| 493 <input style="width: 100px;" id="add1spectrum-peaksMS-rtSolvTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-optional" placeholder="??"> | |
| 494 </div> | |
| 495 <div class="col-lg-4"> </div> | |
| 496 </div> | |
| 497 <div class="col-lg-12"> | |
| 498 <div class="col-lg-11"> | |
| 499 <br> | |
| 500 <ul class="nav nav-tabs" style="margin-bottom: 15px;"> | |
| 501 <li class="active"><a id="link-spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}" href="#spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="tab"><i class="fa fa-table"></i> Peak List</a></li> | |
| 502 <li class=""><a id="link-spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}" href="#spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().updateLCMSspectraViewer()" data-toggle="tab"><i class="fa fa-bar-chart-o"></i> Spectrum Preview</a></li> | |
| 503 </ul> | |
| 504 <div id="spectrum-signal-data-lcms-{{ TAB_INDEX_PLACEHOLDER }}" class="tab-content" style=""> | |
| 505 <div class="tab-pane fade active in" id="spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 506 <div class="panel-body" style="padding: 0px;"> | |
| 507 <div id="container_MS_Peaks-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable col-lg-6" style="display: inline-block;"></div> | |
| 508 | |
| 509 <div class="form-group input-group col-lg-3 has-warning hidden-if-ms"> | |
| 510 <span class="input-group-addon">Precursor ion <small>(M/Z)</small><i class="fa fa-question-circle" title="2 digits of precision."></i></span> | |
| 511 <input id="add1spectrum-peaksMS-msPrecursorIon-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-mandatory add1spectrum-peaksMSForm-peaklist-reset displayed-if-msms" placeholder="e.g. 123.45"> | |
| 512 </div> | |
| 513 </div> | |
| 514 </div> | |
| 515 <div class="tab-pane fade" id="spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 516 <div id="containter-lcms-spectrum-preview-{{ TAB_INDEX_PLACEHOLDER }}" style="width: 80%;"></div> | |
| 517 </div> | |
| 518 </div> | |
| 519 </div> | |
| 520 </div> | |
| 521 <div class="col-lg-12"> | |
| 522 <div class="col-lg-8"> | |
| 523 <button class="btn btn-success" onclick="$('#add1spectrum-peaksMS-msPrecursorIon-{{ TAB_INDEX_PLACEHOLDER }}').change()">check</button> | |
| 524 <button id="btnSwitch-gotoStep5-ms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(5);" class="btn switchStep btn-primary"><i class="fa fa-arrow-circle-down"></i> Next!</button> | |
| 525 <br> | |
| 526 <br> | |
| 527 </div> | |
| 528 <div class="col-lg-4"> </div> | |
| 529 </div> | |
| 530 </div> | |
| 531 </div> | |
| 532 </div> | |
| 533 <div id="add1spectrum-otherData-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;"> | |
| 534 <div class="panel-heading panel-success"> | |
| 535 <h4 class="panel-title"> | |
| 536 <a id="linkActivateStep5-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step5-{{ TAB_INDEX_PLACEHOLDER }}"> | |
| 537 Other <i id="step5sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i> | |
| 538 </a> | |
| 539 </h4> | |
| 540 </div> | |
| 541 <div id="step5-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse"> | |
| 542 <div class="panel-body"> | |
| 543 <div class="col-lg-12"> | |
| 544 <div class="col-lg-6"> | |
| 545 <div class="panel panel-default"> | |
| 546 <div class="panel-heading"> | |
| 547 <h3 class="panel-title">Ownership</h3> | |
| 548 </div> | |
| 549 <div class="panel-body"> | |
| 550 <div class="form-group input-group has-error"> | |
| 551 <span class="input-group-addon">data author(s)</span> | |
| 552 <input id="add1spectrum-other-author-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-mandatory" placeholder="enter your lab. / plateforme name" value=""> | |
| 553 </div> | |
| 554 <div class="form-group input-group has-warning"> | |
| 555 <span class="input-group-addon">data validator(s)</span> | |
| 556 <input id="add1spectrum-other-validator-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="name of the personne who checked all data in this file"> | |
| 557 </div> | |
| 558 <div class="form-group input-group has-warning"> | |
| 559 <span class="input-group-addon">acquisition date</span> | |
| 560 <input id="add1spectrum-other-date-{{ TAB_INDEX_PLACEHOLDER }}" data-date-format="yyyy-mm-dd" type="text" class="form-control add1spectrum add1spectrum-otherForm datepicker is-optional" value="" placeholder="2022-11-04"> | |
| 561 </div> | |
| 562 <div class="form-group input-group has-warning"> | |
| 563 <span class="input-group-addon">data ownership</span> | |
| 564 <input id="add1spectrum-other-owner-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="enter your lab. / plateforme name & sample provider;"> | |
| 565 </div> | |
| 566 </div> | |
| 567 </div> | |
| 568 </div> | |
| 569 <div class="col-lg-6"> | |
| 570 <div class="panel panel-default"> | |
| 571 <div class="panel-heading"> | |
| 572 <h3 class="panel-title">Raw File</h3> | |
| 573 </div> | |
| 574 <div class="panel-body"> | |
| 575 <div class="form-group input-group has-warning"> | |
| 576 <span class="input-group-addon">raw file name</span> | |
| 577 <input id="add1spectrum-other-fileName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="needed to retrieve file later"> | |
| 578 </div> | |
| 579 <div class="form-group input-group has-warning"> | |
| 580 <span class="input-group-addon">raw file size (Ko)</span> | |
| 581 <input id="add1spectrum-other-fileSize-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="optional, to check if the file is correct"> | |
| 582 </div> | |
| 583 </div> | |
| 584 </div> | |
| 585 </div> | |
| 586 </div> | |
| 587 <div class="col-lg-12"> | |
| 588 <div class="col-lg-8"> | |
| 589 <br> | |
| 590 <button id="btnSwitch-gotoStep6-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(6);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-right"></i> Validate this compound/mix!</button> | |
| 591 <!-- <button onclick="enable_tab({{ TAB_INDEX_PLACEHOLDER }})" class="btn btn-success"> | |
| 592 <i class="fa fa-arrow-circle-right"></i>Modify this compound/mix! | |
| 593 </button> --> | |
| 594 <span id="import1SpectrumLoadingBare-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;"><img src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/img/ajax-loader.gif" title="please wait"></span> | |
| 595 <span id="import1SpectrumResults-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;"> | |
| 596 <button id="btnSwitch-view-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="modal" data-target="#modalShowSpectra-{{ TAB_INDEX_PLACEHOLDER }}" class="btn btn-success"><i class="fa fa-eye"></i> View spectrum</button> | |
| 597 <button id="btnSwitch-returntoStep3-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-primary"><i class="fa fa-arrow-circle-up"></i> Add new peaklist!</button> | |
| 598 </span> | |
| 599 </div> | |
| 600 <div class="col-lg-4"><br><br><br></div> | |
| 601 </div> | |
| 602 <div class="col-lg-12"> | |
| 603 <div class="col-lg-8"> | |
| 604 <div id="alertBoxSubmitSpectrum-{{ TAB_INDEX_PLACEHOLDER }}" class="col-lg-6"></div> | |
| 605 </div> | |
| 606 <div class="col-lg-4"> </div> | |
| 607 </div> | |
| 608 </div> | |
| 609 </div> | |
| 610 </div> | |
| 611 </div> | |
| 612 <script src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/dist/handsontable.full.min.js"></script> | |
| 613 <link rel="stylesheet" media="screen" href="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/dist/handsontable.full.min.css"> | |
| 614 <link rel="stylesheet" media="screen" href="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/bootstrap/handsontable.bootstrap.min.css"> | |
| 615 </div> | |
| 616 <div class="modal" id="modalPickCompound-{{ TAB_INDEX_PLACEHOLDER }}" tabindex="-1" role="dialog" aria-labelledby="modalPickCompoundLabel-{{ TAB_INDEX_PLACEHOLDER }}" aria-hidden="true"> | |
| 617 <div class="modal-dialog"> | |
| 618 <div class="modal-content"> | |
| 619 <div class="modal-header"> | |
| 620 <button type="button" class="close" data-dismiss="modal" aria-hidden="true">×</button> | |
| 621 <h4 class="modal-title" id="modalPickCompoundLabel-{{ TAB_INDEX_PLACEHOLDER }}">Pick a compound</h4> | |
| 622 </div> | |
| 623 <div class="modal-body"> | |
| 624 <div class="form-group input-group"> | |
| 625 <span class="input-group-addon">Compound Name</span> | |
| 626 <input id="add-one-cc-s1-value-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control" placeholder="e.g. Caffeine" type="text"> | |
| 627 <span class="input-group-btn"> | |
| 628 <button class="btn btn-default" type="button" onclick="ctx().searchLocalCompound();"> | |
| 629 <i class="fa fa-search"></i> | |
| 630 </button> | |
| 631 </span> | |
| 632 </div> | |
| 633 <div id="load-step-1-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;"> | |
| 634 <img src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/img/ajax-loader.gif" title="please wait"> | |
| 635 </div> | |
| 636 <div id="ok-step-1-{{ TAB_INDEX_PLACEHOLDER }}" style="overflow: auto; max-height: 300px;"></div> | |
| 637 </div> | |
| 638 <div class="modal-footer"> | |
| 639 <button type="button" class="btn btn-danger" data-dismiss="modal" onclick="ctx().clearLine()"> | |
| 640 <i class="fa fa-eraser"></i> Clear | |
| 641 </button> | |
| 642 <button type="button" class="btn btn-default" data-dismiss="modal">Fermer</button> | |
| 643 </div> | |
| 644 </div> | |
| 645 </div> | |
| 646 </div> | |
| 647 <div class="modal " id="modalShowSpectra-{{ TAB_INDEX_PLACEHOLDER }}" tabindex="-1" role="dialog" aria-labelledby="modalShowSpectraLabel-{{ TAB_INDEX_PLACEHOLDER }}" aria-hidden="true"> | |
| 648 <div class="modal-dialog"> | |
| 649 <div class="modal-content"> | |
| 650 <div class="modal-header"> | |
| 651 <button type="button" class="close" data-dismiss="modal" aria-hidden="true">×</button> | |
| 652 <h4 class="modal-title" id="modalShowSpectraLabel-{{ TAB_INDEX_PLACEHOLDER }}">Modal title</h4> | |
| 653 </div> | |
| 654 <div class="modal-body"> | |
| 655 <div class="te"></div> | |
| 656 </div> | |
| 657 <div class="modal-footer"> | |
| 658 </div> | |
| 659 </div> | |
| 660 </div> | |
| 661 </div> |
