diff test/test.sh @ 0:a174cbbb12dd draft

" master branch Updating"
author lain
date Tue, 24 Nov 2020 18:55:08 +0000
parents
children 5be8a770a11d
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test/test.sh	Tue Nov 24 18:55:08 2020 +0000
@@ -0,0 +1,18 @@
+#!/bin/sh
+
+currdir=`pwd`
+cd `dirname $(readlink -f $0)`
+
+ln -s ../data/ ./data
+
+~/R/bin/Rscript $(realpath ../XSeekerPreparator.R)  \
+    -i $(realpath ../data/full.rdata)               \
+    -m $(realpath ../data/models.R)                 \
+    -c $(realpath ../data/SERUM_v2019Jan17.tabular) \
+    -o $(realpath ../test.sqlite)                   \
+|| true
+
+
+
+rm -rf "./data"
+cd "${currdir}"