Mercurial > repos > lain > xseekerpreparator

view test/test.sh @ 16:1d91c4600466 draft

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dev branch update
author fgiacomoni
date Mon, 05 Jul 2021 10:30:12 +0000
parents f4fc4a0f41e2
children 2937e72e5891
line wrap: on
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#!/bin/sh

currdir=`pwd`
cd `dirname $(readlink -f $0)`

ln -s ../data/ ./data

~/R/bin/Rscript $(realpath ../XSeekerPreparator.R)  \
    -i $(realpath ../data/test.rdata)         \
    -m $(realpath ../data/models.R)                 \
    -c $(realpath ../data/SERUM_v2019Jan17.tabular) \
    -o $(realpath ../test.sqlite)                   \
|| true



rm -rf "./data"
cd "${currdir}"