Mercurial > repos > lain > xseekerpreparator

view test/test.sh @ 3:fa97d16330be draft

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" master branch Updating"
author lain
date Thu, 17 Dec 2020 10:13:58 +0000
parents a174cbbb12dd
children 5be8a770a11d
line wrap: on
line source

#!/bin/sh

currdir=`pwd`
cd `dirname $(readlink -f $0)`

ln -s ../data/ ./data

~/R/bin/Rscript $(realpath ../XSeekerPreparator.R)  \
    -i $(realpath ../data/full.rdata)               \
    -m $(realpath ../data/models.R)                 \
    -c $(realpath ../data/SERUM_v2019Jan17.tabular) \
    -o $(realpath ../test.sqlite)                   \
|| true



rm -rf "./data"
cd "${currdir}"