Mercurial > repos > lain > xseekerpreparator

changeset 16:1d91c4600466 draft

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dev branch update
author fgiacomoni
date Mon, 05 Jul 2021 10:30:12 +0000
parents b349282e7001
children d8112d636210
files XSeekerPreparator.xml galaxy/tools/LC-MSMS/XSeekerPreparator.xml
diffstat 2 files changed, 28 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/XSeekerPreparator.xml	Wed Jun 02 13:32:51 2021 +0000
+++ b/XSeekerPreparator.xml	Mon Jul 05 10:30:12 2021 +0000
@@ -1,6 +1,6 @@
 <tool id="xseeker_preparator"
       name="XSeeker Preparator"
-      version="1.2.2"
+      version="1.2.3"
 >
     <description>Prepare RData file from CAMERA to be visualized in XSeeker</description>
     
@@ -10,6 +10,18 @@
     </edam_operations>
     
     <requirements>
+        <requirement type="package" >bioconductor-xcms</requirement>
+        <requirement type="package" version="1.48.0">bioconductor-camera</requirement>
+        <requirement type="package" >git</requirement>
+        <requirement type="package" >r-blob</requirement>
+        <requirement type="package" >r-dbi</requirement>
+        <requirement type="package" >r-fst</requirement>
+        <requirement type="package" >r-optparse</requirement>
+        <requirement type="package" >r-stringr</requirement>
+        <requirement type="package" >r-purrr</requirement>
+        <requirement type="package" >r-rsqlite</requirement>
+        <requirement type="package" >r-dbmodelr</requirement>
+        <!-- 
         <requirement type="package" version="3.12.0">bioconductor-xcms</requirement>
         <requirement type="package" version="1.48.0">bioconductor-camera</requirement>
         <requirement type="package" version="2.29.2">git</requirement>
@@ -21,6 +33,7 @@
         <requirement type="package" version="0.3.4">r-purrr</requirement>
         <requirement type="package" version="2.2.1">r-rsqlite</requirement>
         <requirement type="package" version="0.2.0">r-dbmodelr</requirement>
+         -->
     </requirements>
     <stdio>
 
--- a/galaxy/tools/LC-MSMS/XSeekerPreparator.xml	Wed Jun 02 13:32:51 2021 +0000
+++ b/galaxy/tools/LC-MSMS/XSeekerPreparator.xml	Mon Jul 05 10:30:12 2021 +0000
@@ -1,6 +1,6 @@
 <tool id="xseeker_preparator"
       name="XSeeker Preparator"
-      version="1.2.2"
+      version="1.2.3"
 >
     <description>Prepare RData file from CAMERA to be visualized in XSeeker</description>
     
@@ -10,6 +10,18 @@
     </edam_operations>
     
     <requirements>
+        <requirement type="package" >bioconductor-xcms</requirement>
+        <requirement type="package" version="1.48.0">bioconductor-camera</requirement>
+        <requirement type="package" >git</requirement>
+        <requirement type="package" >r-blob</requirement>
+        <requirement type="package" >r-dbi</requirement>
+        <requirement type="package" >r-fst</requirement>
+        <requirement type="package" >r-optparse</requirement>
+        <requirement type="package" >r-stringr</requirement>
+        <requirement type="package" >r-purrr</requirement>
+        <requirement type="package" >r-rsqlite</requirement>
+        <requirement type="package" >r-dbmodelr</requirement>
+        <!-- 
         <requirement type="package" version="3.12.0">bioconductor-xcms</requirement>
         <requirement type="package" version="1.48.0">bioconductor-camera</requirement>
         <requirement type="package" version="2.29.2">git</requirement>
@@ -21,6 +33,7 @@
         <requirement type="package" version="0.3.4">r-purrr</requirement>
         <requirement type="package" version="2.2.1">r-rsqlite</requirement>
         <requirement type="package" version="0.2.0">r-dbmodelr</requirement>
+         -->
     </requirements>
     <stdio>