diff tools/myTools/13_translate_perts.xml @ 1:7e5c71b2e71f draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/myTools/13_translate_perts.xml	Wed Dec 22 16:00:34 2021 +0000
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+<tool id="netisce13" name="Netisce Step 13" version="0.1.0" R_template_version="3.6.3">
+<description>Translates combinations of perturbations on FVS control nodes into readable format.</description>
+
+    <requirements>
+        <requirement type="package" version="1.0.7">dplyr</requirement>
+        <requirement type="package" version="3.3.0">ggplot2</requirement>
+    </requirements>
+    
+    <command> Rscript '$__tool_directory__/bin/pertanalysis.R' '$perts' successful_controlnode_perturbations.txt</command>
+
+    <inputs>
+        <param name="perts" type="data" format="txt" label="Successful Perturbations"/>
+    </inputs>
+
+    <outputs>
+        <data name="output" format="txt" from_work_dir="successful_controlnode_perturbations.txt" label="FVS control node perturbations that passed both filtering criteria"/>
+    </outputs>
+
+    <tests>
+        <test>
+            <param name="perts" value="extract_perts.txt" />
+            <output name="output" value="successful_controlnode_perturbations.txt" ftype="txt" />
+        </test>
+    </tests>
+
+    <help>
+    This tool translates combinations of perturbations on FVS control nodes into readable format
+    Required Inputs:
+    1. Successful Perturbations that shifted network from undesired to desired state
+    </help>
+
+</tool>
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