Mercurial > repos > laurenmarazzi > netisce_test
view tools/myTools/bin/get_RONs_getperts.py @ 1:7e5c71b2e71f draft default tip
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author | laurenmarazzi |
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date | Wed, 22 Dec 2021 16:00:34 +0000 |
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#!/usr/bin/env python3 import pandas as pd import sys def main(): # read in sfa attractors df=pd.read_csv(sys.argv[1], delim_whitespace=True,index_col=[0,1]) perts=open(sys.argv[3],"r").read().split('\n') del perts[-1] #print(perts) # read in rons rons = open(sys.argv[2],"r").read().strip().split('\n') #get the rons and their values df1=df.loc[pd.IndexSlice[:,perts],rons] df1.to_csv("internal_markers.txt",sep=' ',na_rep='NA') main()