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date Mon, 11 Sep 2023 22:40:34 +0000
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1
2 Changelog/News
3 --------------
4
5 **Version 2.2.6+camera1.48.0 - 11/06/2021**
6
7 - UPGRADE: upgrade the CAMERA version from 1.46.0 to 1.48.0 (see CAMERA News_)
8
9 **Version 2.2.6+camera1.46.0 - 12/04/2021**
10
11 - UPGRADE: upgrade the CAMERA version from 1.42.0 to 1.46.0 (see CAMERA News_)
12
13 **Version 2.2.6+camera1.42.0+galaxy1 - 09/03/2020**
14
15 - BUGFIX: Fix the zip export of the pictures (eic and boxplot)
16
17 **Version 2.2.5+camera1.42.0 - 13/02/2020**
18
19 - UPGRADE: upgrade the CAMERA version from 1.38.1 to 1.42.0 (see CAMERA News_)
20
21 **Version 2.2.5 - 09/04/2019**
22
23 - NEW: zip export are back for pictures (eic and boxplot) and diffreport tables
24
25 - UPGRADE: upgrade the CAMERA version from 1.34.0 to 1.38.1 (see CAMERA News_)
26
27 - UPGRADE: refactoring of internal code
28
29 **Version 2.2.4 - 09/10/2018**
30
31 - NES: CAMERA.annotate no longer export a DataMatrix. fillChromPeaks does the job
32
33 **Version 2.2.3 - 30/04/2018**
34
35 - NEW: support the new xcms 3.0.0 wrapper
36
37 **Version 2.2.2 - 01/03/2018**
38
39 - UPGRADE: upgrate the CAMERA version from 1.26.0 to 1.32.0
40
41 **Version 2.2.1 - 29/11/2017**
42
43 - BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C
44
45 **Version 2.2.0 - 03/02/2017**
46
47 - BUGFIX: the diffreport ids didn't convert the rt in minute as the other export
48
49 - UPDATE: the settings (digits, convertion in minutes) of the identifiants will no longer modify the native one. Because we want to be conservative and because it can be dangerous for the data integrity during a futur merge of the table, we decide to put those customization in a new column namecustom within the variableMetadata.
50
51 - IMPROVEMENT: add some sections within the form to separate the different parts of the process
52
53 - IMPROVEMENT: add the possibility to use defined ruleset
54
55 - IMPROVEMENT: add the possibility to set the MZ digit within the identifiants
56
57 - IMPROVEMENT: CAMERA.annotate is now compatible with merged individual data from xcms.xcmsSet
58
59
60 **Version 2.1.5 - 21/04/2016**
61
62 - UPGRADE: upgrate the CAMERA version from 1.22.0 to 1.26.0
63
64
65 **Version 2.1.4 - 18/04/2016**
66
67 - TEST: refactoring to pass planemo test using conda dependencies
68
69 **Version 2.1.3 - 10/02/2016**
70
71 - BUGFIX: better management of errors. Datasets remained green although the process failed
72
73 - BUGFIX: the conversion into minutes of the retention time was applied to the diffreport outputs (several conditions)
74
75 - IMPROVEMENT: when there are several conditions, the tool will generate individual datasets (tsv, pdf) instead of a zip file. The usual png (eic, boxplot) will from now be integrated in two pdf.
76
77 - UPDATE: refactoring of internal management of inputs/outputs
78
79
80 **VERSION 2.1.0 - 09/10/2015**
81
82 - BUGFIX: There was a bug with the CAMERA.annotate (generating a bad dataMatrix (intensities which don't match with the metabolites))
83
84
85 **VERSION 2.1.0 - 07/06/2015**
86
87 - IMPROVEMENT: new datatype/dataset formats (rdata.camera.positive, rdata.camera.negative, rdata.camera.quick ...) will facilitate the sequence of tools and so avoid incompatibility errors.
88
89 - IMPROVEMENT: parameter labels have changed to facilitate their reading.
90
91 - UPDATE: merged with annotateDiffreport. Some parameters are dedicated to experiences with several conditions