Mercurial > repos > lecorguille > camera_annotate
diff abims_CAMERA_annotateDiffreport.xml @ 10:8dd6f0ffa763 draft
planemo upload commit 62670148178273a855c42e85438ce731548ada48-dirty
author | lecorguille |
---|---|
date | Mon, 04 Jul 2016 08:52:04 -0400 |
parents | 7da9252dd983 |
children | 1c30ff90f3ae |
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--- a/abims_CAMERA_annotateDiffreport.xml Mon Apr 25 11:06:25 2016 -0400 +++ b/abims_CAMERA_annotateDiffreport.xml Mon Jul 04 08:52:04 2016 -0400 @@ -47,10 +47,8 @@ mzdec $options.mzdec new_file_path ${__new_file_path__}/primary_${output_diffreport.id}_ #end if - - #if $zip_file: - zipfile $zip_file - #end if + + @COMMAND_ZIPFILE_LOAD@ ]]></command> @@ -126,9 +124,8 @@ <when value="hide"> </when> </conditional> - - <!-- To pass planemo test --> - <param name="zip_file" type="data" format="no_unzip.zip,zip" label="Zip file" help="Use only if you get a message which say that your original zip file have been deleted on the server." /> + + <expand macro="zipfile_load"/> </inputs> <outputs> @@ -210,7 +207,8 @@ <param name="options|w" value="640"/> <param name="options|mzdec" value="2"/> <param name="options|sortpval" value="False"/> - <param name="zip_file" value="faahKO_reduce.zip" ftype="zip" /> + <param name="zipfile_load_conditional|zipfile_load_select" value="yes" /> + <param name="zipfile_load_conditional|zip_file" value="faahKO_reduce.zip" ftype="zip" /> <output name="variableMetadata" file="faahKO.xset.group.retcor.group.fillPeaks.annotate.variableMetadata.tsv" /> <output name="datamatrix" file="faahKO.xset.group.retcor.group.fillPeaks.annotate.dataMatrix.tsv" /> </test>