changeset 14:225cb8347572 draft

planemo upload commit 239d7043ccba9d1d1861d7d8ac353c77497e0880
author lecorguille
date Wed, 29 Nov 2017 10:03:27 -0500
parents 1c30ff90f3ae
children 6139bfcc95cb
files README.rst abims_CAMERA_annotateDiffreport.xml macros.xml
diffstat 3 files changed, 10 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/README.rst	Fri Apr 07 07:42:18 2017 -0400
+++ b/README.rst	Wed Nov 29 10:03:27 2017 -0500
@@ -2,6 +2,10 @@
 Changelog/News
 --------------
 
+**Version 2.2.1 - 29/11/2017**
+
+- BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C
+
 **Version 2.2.0 - 03/02/2017**
 
 - BUGFIX: the diffreport ids didn't convert the rt in minute as the other export
--- a/abims_CAMERA_annotateDiffreport.xml	Fri Apr 07 07:42:18 2017 -0400
+++ b/abims_CAMERA_annotateDiffreport.xml	Wed Nov 29 10:03:27 2017 -0500
@@ -1,4 +1,4 @@
-<tool id="abims_CAMERA_annotateDiffreport" name="CAMERA.annotate" version="2.2.0">
+<tool id="abims_CAMERA_annotateDiffreport" name="CAMERA.annotate" version="2.2.1">
 
     <description>CAMERA annotate function. Returns annotation results (isotope peaks, adducts and fragments) and a diffreport if more than one condition.</description>
 
@@ -424,6 +424,10 @@
 Changelog/News
 --------------
 
+**Version 2.2.1 - 29/11/2017**
+
+- BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C
+
 **Version 2.2.0 - 28/03/2017**
 
 - BUGFIX: the diffreport ids didn't convert the rt in minute as the other export
--- a/macros.xml	Fri Apr 07 07:42:18 2017 -0400
+++ b/macros.xml	Wed Nov 29 10:03:27 2017 -0500
@@ -16,7 +16,7 @@
     </xml>
 
     <token name="@COMMAND_CAMERA_SCRIPT@">
-        LANG=C Rscript $__tool_directory__/CAMERA.r
+        LC_ALL=C Rscript $__tool_directory__/CAMERA.r
     </token>
 
     <!-- raw file load for planemo test -->