Mercurial > repos > lecorguille > msnbase_readmsdata

diff lib.r @ 7:d7a7ef786fbe draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4632d03b53c344757d71dd3310d37069fb498b26
author lecorguille
date Tue, 12 Mar 2019 10:58:41 -0400
parents 2a69f9923a70
children a874afcb71ca
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line diff
--- a/lib.r	Thu Mar 07 07:35:39 2019 -0500
+++ b/lib.r	Tue Mar 12 10:58:41 2019 -0400
@@ -69,7 +69,7 @@
             chromBPI_adjusted_merged <- chromBPI_adjusted
         } else {
             if (is(xdata, "XCMSnExp")) xdata_merged <- c(xdata_merged,xdata)
-            else if (is(xdata, "OnDiskMSnExp")) xdata_merged <- .concatenate_OnDiskMSnExp(xdata_merged,xdata)
+            else if (is(xdata, "OnDiskMSnExp")) xdata_merged <- xcms:::.concatenate_OnDiskMSnExp(xdata_merged,xdata)
             else stop("\n\nERROR: The RData either a OnDiskMSnExp object called raw_data or a XCMSnExp object called xdata")
 
             singlefile_merged <- c(singlefile_merged,singlefile)