Mercurial > repos > lecorguille > xcms_fillpeaks

diff test-data/log.txt @ 3:5a54397dbc97 draft

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planemo upload
author lecorguille
date Mon, 22 Feb 2016 16:40:19 -0500
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children 2edfa5e1f719
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/log.txt	Mon Feb 22 16:40:19 2016 -0500
@@ -0,0 +1,55 @@
+	PACKAGE INFO
+parallel	3.1.2
+BiocGenerics	0.14.0
+Biobase	2.28.0
+Rcpp	0.12.0
+mzR	2.2.2
+xcms	1.44.0
+snow	0.3.13
+batch	1.1.4
+
+
+	ARGUMENTS INFO
+xfunction	fillPeaks
+image	test-data/xset.group.retcor.group.RData
+xsetRdataOutput	test-data/xset.group.retcor.group.fillPeaks.RData
+method	chrom
+zipfile	test-data/sacuri.zip
+
+
+	INFILE PROCESSING INFO
+
+
+	ARGUMENTS PROCESSING INFO
+
+
+	MAIN PROCESSING INFO
+./sacuri/bio/HU_neg_028.mzXML 
+./sacuri/bio/HU_neg_060.mzXML 
+./sacuri/bio/HU_neg_051.mzXML 
+./sacuri/bio/HU_neg_017.mzXML 
+./sacuri/bio/HU_neg_034.mzXML 
+./sacuri/blank/Blanc09.mzXML 
+./sacuri/blank/Blanc06.mzXML 
+./sacuri/blank/Blanc12.mzXML 
+./sacuri/blank/Blanc04.mzXML 
+null device 
+          1 
+
+
+	XSET OBJECT INFO
+An "xcmsSet" object with 9 samples
+
+Time range: 0.7-1139.9 seconds (0-19 minutes)
+Mass range: 50.0019-999.9863 m/z
+Peaks: 157780 (about 17531 per sample)
+Peak Groups: 6761 
+Sample classes: bio, blank 
+
+Profile settings: method = bin
+                  step = 0.01
+
+Memory usage: 17.4 MB
+
+
+	DONE